Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0416 ATGGAGATTGCTGTTGTTACTCCTGGTGAGAAAAATGGTGACGCATCTAACACGAATGCCTTGAAGCTTTGGCCTGTGGCAGCAGAAGAAACTGGTGAAGGTTTGCCTTATGCGCCTGAGAATTGGCCCGAGCCTGGCGATGTTTGGGGATGGAGAACCGGTAGGAGAGTTGCTTTGACTGGCCATTTTCTGGATAGGTACCTGTATCTTCCCACGCGTCTTTGTCGCCCTGGGAACCCAGGCTCGAGCCGCAAACAGAGGCTCTGTTTTCCTAGCAGGCTTTCAGCTGAACGCTACGTCAAAACAAAGTTTCCTGAGGCAGACATTGATGCATTTTTCGCTTCATTTAGCTGGAAGATTCCGGCCATACCACCGGCGCCAACAAATGGCGATTTAGTGCCTATAGCTGTTGTACCTCTTCAACAGATATCAATAAAAGAACTCACAACTTCTGATATCCATTCTGAACTGCTTGGATGTAAAGCTTCAAATAAGACGTGCAACAGTGTGATATTAGAAAAAGGAGAAAAGAGTTTACCAGCCATGCCTTGTGATATTTGCTGTGGTGAACCTGGATTTTGCCGTGATTGTTGCTGCATTCTTTGTTGCCAAACTGTTGATTCGGCTTATGGAGGCTATAGTTACATCCAATGTCAAGAAAAGACCGGTAATAATATATGTGGCCATATTGCACATGTGGAATGTGCTCTTCGATCACGCATGGCTGGAACAGTTGGAGGAAGTATTGGATTAAATACTGAGTATCATTGCCGACGATGTGATAGGAGGACTGATTTGATTTCTCAGGTTAATAAGCTTCTACAGACATGTAAAAATATAAATTCAAGGGGTGACATTGAAAAGATTTTAAACCTTGGTGCTTGTCTCTTGCGTGGTACGCAGAAAGCTATCGCAATGGAGCTGCTGAGTCGAATTGAATTGGCCATTTCAAAGCTTAAATGTGGGACTCACCTTGAAGATATCTGGAAGGTGGATGGCAATCATACAGCTTTTACTGCAGGCTTCTCAGATAATGACAATGCTGCAATGGAAGACGTAGTCAATGAGAGCCCTTTAGATGTTAGAATGACAGAATCTTATGATGGTTATCTGCCTGATTTATTAAAACTTGAGGTTGAGACTGATCAGGTTCTCCAGGCTCTTAGAAAGTCACAGGAGTTGGAATATCAAGTAGCGGAAGAAAGACTTCACGCACAGAAGAATTATCTAAAAAATTTGTATCGGCAATTGGATAGTGAGAAGTCTGAGTTGGCATGTCAACGATCATCTTATTCAGGTGTCCTGTCTAATTCTGTCAGAGACAGAAACGAGCAGATAAAACAGGAATTCATGAAACTTAAAGACATGGGAAAGATAGCCAATGGCTTTGGCAGGACTCCCAAAGATATTTTAAAGAAACACTTCGGCTTAAAAATTGAAGATTAA 1446 0.426 MEIAVVTPGEKNGDASNTNALKLWPVAAEETGEGLPYAPENWPEPGDVWGWRTGRRVALTGHFLDRYLYLPTRLCRPGNPGSSRKQRLCFPSRLSAERYVKTKFPEADIDAFFASFSWKIPAIPPAPTNGDLVPIAVVPLQQISIKELTTSDIHSELLGCKASNKTCNSVILEKGEKSLPAMPCDICCGEPGFCRDCCCILCCQTVDSAYGGYSYIQCQEKTGNNICGHIAHVECALRSRMAGTVGGSIGLNTEYHCRRCDRRTDLISQVNKLLQTCKNINSRGDIEKILNLGACLLRGTQKAIAMELLSRIELAISKLKCGTHLEDIWKVDGNHTAFTAGFSDNDNAAMEDVVNESPLDVRMTESYDGYLPDLLKLEVETDQVLQALRKSQELEYQVAEERLHAQKNYLKNLYRQLDSEKSELACQRSSYSGVLSNSVRDRNEQIKQEFMKLKDMGKIANGFGRTPKDILKKHFGLKIED 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0416 481 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 11 479 - -
Glsi13g0416 481 Pfam PHD - plant homeodomain finger protein 163 295 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0416 Glsi-ChrGlsi13 22711997 22714344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0416 181 320 PHD Gene Family AT5G57380 30.000 1.61e-06 48.9