Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0389 ATGGCCTCCCTCCATAATCATCATTTCTTCTGGGTCGCCCTCCTCCTCATTCTCCTCTCCATTAACCCTTCTCACCAACAATCCCTGAATCTCACTCTCCCCCAGTTCAATCCCAGACTCCTAAAAGCCTATGCAGCCCTGCAAGCATGGAAGCGCTCTATAACCTCTGACCCCAACAACTTCACCTCCAATTGGTGCAACCTCCATGTCTGCAACTACACCGGAGTCTACTGTGCACCAGCCCCAAATGATCCCAACACCATTACAGTTGCTGGAATAGACCTCAACCACGCCAATATAGCTGGCTCTTTACCGGAGGAACTTGGCCTCTTAAGCGACCTTGCCCTTTTCCACATCAACTCCAATCGCTTCTGTGGGTCCCTACCCGACAGCTTTCGCTTCCTGGACCTTCTTCACGAGCTGGATATTAGTAATAACCAGTTCTCTGGACCATTTCCTGAGATTGTTCTTGAACTTTGTTCGTTGAAATTCTTGGATATTAGGTTCAATGAGTTCCAAGGTGAAGTTCCTTCACGGGTTTTTGACCTCAGACTCGATGCCCTTTTCATTAACAATAATAAATTTCAATTCTCCTTGCCGGAAAATCTCGGGAATTCGCCGGTGTCGGTGCTTGTTTTCGCGAATAACGATGTCAAAGGTTGTCTTCCTTCGAGTTTAGCCAGAATGAAGGACACTCTCAATGAGATTTTGATTGTGAATAGTGGGCTGAAGGGTTGTTTGCCAACGGAAATTGGAGAATTGAACAAAGTTACGGTTTTTGATGTGAGTTCTAACGATTTGGTGGGACCATTGCCGGAATCTATGGGAGGAATGAAGAGCTTGGAGCAGTTGAATGTGGCCCATAACAAACTTTCCGGCGAGATTCCGGCGAGTATTTGCTCGTTGCCTAGGTTGCAGAACTTCACGTACTCGTTTAATTACTTCTGCAGCGAACCGCCGATGTGTCTGAAGTTGCCGGCTAAAGATGATCGGAAAAATTGTATTCCGGAGAGGCCATTGCAGAGGTCAGAACAGGAATGTGCAGCTTTTAATGCACACCCGGTTGATTGTAGTGCCTTTGGATGCTCCTATAGAACTACGTCACCGCCGCCTCCACCACCGCCTCCTCCTCCTCCTCCTCCGTCACCTCCACCGCCATCGCCACCGCCTCCACCACCTCCGCCGCCGCCGCCTCCTCCACCTCCCCCTGTGGTTCACTATCATTACCCATGA 1233 0.4923 MASLHNHHFFWVALLLILLSINPSHQQSLNLTLPQFNPRLLKAYAALQAWKRSITSDPNNFTSNWCNLHVCNYTGVYCAPAPNDPNTITVAGIDLNHANIAGSLPEELGLLSDLALFHINSNRFCGSLPDSFRFLDLLHELDISNNQFSGPFPEIVLELCSLKFLDIRFNEFQGEVPSRVFDLRLDALFINNNKFQFSLPENLGNSPVSVLVFANNDVKGCLPSSLARMKDTLNEILIVNSGLKGCLPTEIGELNKVTVFDVSSNDLVGPLPESMGGMKSLEQLNVAHNKLSGEIPASICSLPRLQNFTYSFNYFCSEPPMCLKLPAKDDRKNCIPERPLQRSEQECAAFNAHPVDCSAFGCSYRTTSPPPPPPPPPPPPPSPPPPSPPPPPPPPPPPPPPPPVVHYHYP 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0389 410 MobiDBLite consensus disorder prediction 366 410 - -
Glsi13g0389 410 Pfam Leucine rich repeat N-terminal domain 44 78 IPR013210 -
Glsi13g0389 410 FunFam Leucine-rich repeat extensin-like protein 1 44 205 - -
Glsi13g0389 410 Pfam Leucine Rich Repeat 280 302 IPR001611 GO:0005515
Glsi13g0389 410 SUPERFAMILY L domain-like 44 326 - -
Glsi13g0389 410 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 227 318 - -
Glsi13g0389 410 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 406 - -
Glsi13g0389 410 Gene3D Ribonuclease Inhibitor 206 335 IPR032675 -
Glsi13g0389 410 Gene3D Ribonuclease Inhibitor 42 205 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0389 Glsi-ChrGlsi13 22213746 22214978 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0389 34 362 Leucine-rich Repeat extension Gene Families AT3G22800 69.091 6.42e-166 472