Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0387 ATGCTTCAGGTTTTTCCTCAAATGGGCATTGAAGCTGATGATCAGAAGTTCCCTCACCGCGTAGCCATTCCTCCTCCCAAGCCATTCCTCAAATCCCTCAAGTCTTCTCTCAAGGAAACGCTCTTCGCCGATGACCCTTTCCGGCAATTCAAGAAGCAACCCCTTTACAGGAGAATCATCCTCGCCTTGCAGTTCTTCATACCCATCCTCTCATGGGCTCCTCACTACAGTTTCGCCTACTTGAGGAGCGATATCATCGCCGGAATCACCATTGCCAGCCTCTCTGTTCCTCAGGGGATCAGCTACGCAAGCTTGGCCAGTTTGCCACCCATTGTTGGTCTATATTCTAGCTTTGTACCTCCATTGGTGTATGCCATGTTGGGAAGCTCTAAAGATCTGGCAGTGGGGCCAGCAGCTGTTCCATCTCTTCTGATGTCTTCTTTGATAGGGAAGGAGGTCAACCCAACACAGAACCCCAAGCTCTATCTTCAATTGGTTCTCACTGCAACATTTTTTGGTGGACTTTTCCAAGCTTGTCTTGGCTTTTTAAGATTTGGGTTTGTTGTGGACTTTCTGTCGCATGCTGCAATAGTAGGTTTCATGGGCGGGGCTGCCACAGTGGTAGGTCTTCAGCAGCTGAAGGGAATCCTTGGGTTGACGCACTTCACTCATTCCACTGATATTATTTCAGTTTGCAAGTCCATTTTCATCCAAACACACCAGTGGAAATGGCAAAGTGCTCTCTTGGGTTGCTGTTTCCTTACCTTCCTCGTAACCTCAAGACAACTGAGAAAAAGAAGACCAGCCTTTTTCTGGTTGAACGCGTTGGCACCTCTGACCTCTGTGATCTTGGGAAGCGCTATTGTGTATTTCACTCATGCTGATAAACATGGCATTCAAGTGATTGGGCACCTGAAGAAAGGCTTAAATCCAGTGACTGTGTCTGAGTTGGAGTTCGGGTCTCCATATCTAAAACTAGCCATTAAAGTTGGAATCATCAATGGTATAATAGCCTTCGCTGAAGGAGTTGCAGTTGGGAGAAGCTTAGCTATCTTAAAAAACTACCACATTGATGGGAACAAAGAGATGATCGCTTTCGGGATGATGAACATTGTTGGGTCCTGCACATCTTGTTACTTAGCCACCGGGCCATTCTCACGAAGTGCTGTGAATTATAATGCTGGGTGCAAGACAGCAGCATCCAACATATGTCGAAATCGGCTTAGTCATTGCAGTAACTATTTCATTGTTCTTCAAATTGATGGACCCATCTATTTTGCCAACACAAATTACTTAAGGGAAAGACTTTCAAGATGGATCTTTGAAGAGGAAGACAGGCTAAAAGCCTCAGGAGAAAGCAGTTTACAATATGTTGTATTAGACCTAAGCGCTGTTTCTAGCATTGATACAAGTGGAGTCAGCATGCTGGACGAAGTCTGCAAAACTGCTGGCAGAAAGGGCCTTAAGCTGGCGCTAGCAAACCCACGAAGTGAGGTGATTAAGAAGCTAAGCAAATCAAAGTTGATCGAAACCATTGGTGAAGAATGGATTTATCTGACTGTAGCAGAGGCTGTGGCTACATGCAGCTTCATGCTTCATACCTGCAAGGCCAACCAAATCGTAGTCGAATCAAATGCACAAGATGACAATGTCTAA 1656 0.4553 MLQVFPQMGIEADDQKFPHRVAIPPPKPFLKSLKSSLKETLFADDPFRQFKKQPLYRRIILALQFFIPILSWAPHYSFAYLRSDIIAGITIASLSVPQGISYASLASLPPIVGLYSSFVPPLVYAMLGSSKDLAVGPAAVPSLLMSSLIGKEVNPTQNPKLYLQLVLTATFFGGLFQACLGFLRFGFVVDFLSHAAIVGFMGGAATVVGLQQLKGILGLTHFTHSTDIISVCKSIFIQTHQWKWQSALLGCCFLTFLVTSRQLRKRRPAFFWLNALAPLTSVILGSAIVYFTHADKHGIQVIGHLKKGLNPVTVSELEFGSPYLKLAIKVGIINGIIAFAEGVAVGRSLAILKNYHIDGNKEMIAFGMMNIVGSCTSCYLATGPFSRSAVNYNAGCKTAASNICRNRLSHCSNYFIVLQIDGPIYFANTNYLRERLSRWIFEEEDRLKASGESSLQYVVLDLSAVSSIDTSGVSMLDEVCKTAGRKGLKLALANPRSEVIKKLSKSKLIETIGEEWIYLTVAEAVATCSFMLHTCKANQIVVESNAQDDNV 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0387 551 CDD STAS_SulP_like_sulfate_transporter 416 521 - -
Glsi13g0387 551 SUPERFAMILY SpoIIaa-like 414 528 IPR036513 -
Glsi13g0387 551 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Glsi13g0387 551 Pfam STAS domain 416 524 IPR002645 -
Glsi13g0387 551 Gene3D STAS domain 407 532 IPR036513 -
Glsi13g0387 551 PANTHER SULFATE TRANSPORTER 415 536 IPR001902 GO:0016020|GO:0055085
Glsi13g0387 551 ProSiteProfiles STAS domain profile. 416 528 IPR002645 -
Glsi13g0387 551 Pfam Sulfate permease family 81 404 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0387 Glsi-ChrGlsi13 22185405 22192864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0387 415 545 Inorganic Solute Cotransporters AT4G02700 64.885 3.86e-50 181