Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0386 ATGGGAAAGACAAGCAAATGGATTAGGAACATCTTGACGGGGAAGAAAGACAAGGCAGCGAATCTGAACTCTTCAAATGGCACTGAAAATCCAACCACTCCAATCTCAACAACCCCAAAAGAGAAGAGGAGATGGAGTTTCCGAAGATCATCAGCAACATCAACTTCCCCAGCTTCCAAGGAATTGAATTCTGCAGAATCAAATGTTGCTGCTACTTCAATGACAGTGCAGCAGCAGCAGCAGCCTGTAATAGATGCTGAGAATATTGAGCAGAAGAAACATGCCATGGCTGTGGCTGCCGCCACGGCAGCCGCAGCTGATGCCGCGGTGGCTGCTGCTCAGGCTGCCGCTGCTGTGATTCGCTTGACTTCTGGCTCTAAAGGGACTGCTAGCTGTACTGAGGAGGCTGCAGCCATTAAAATTCAATCTGTTTTTCGCTCTTATTTGGCAAGGAAGGCATTGTGTGCGCTTAGAGGGTTAGTGAAATTGCAGGCACTGGTAAGGGGTCATTTGGTGAGAAAACAGGCAAAAGCTACATTGAGGGGCATGCAGGCTTTGGTGACGGCACAAGCAAGAGCTCGTGCTGAGAGGATCCGAATGGCTTTAGAGGAAAATCCTAATCAAAGACAGTCAACCCACCGAAAACTAGCTCAGGACAATTTGTTCAGAGATTTGTATGACGAGATGGACATGAGCTTGGAAGAGAACATCAAGATAGTAGAAATGGATGTGTGTGAATCAAAATTTGACACCAGAAGAAGAAACAGCAGCAACCCAAATCCCTCATCCCATCGTGACCGTTCTTCTGACCACAGATTCTCCACATACTATTCATCAAATGGTTCATACTCAAAGGAAGAAAGCTGCAGGGTATCCCCAGCACCATCAGCCCTAACAGAGCTAAGCCCAAGAGCTTGCAGTGGCCATTTTGAGGATTGTTCCTTAAGCACAGCACAGAGTAGCCCCAAATACTACTCAGCCATATCAAAACCTGATGATTCTTCAAAGCTTCCTTTTGCTTTTCCCAGGCCAGCTTATGCAGAATCCATGGCCTATGACTACCCTTTGTTCCCAAATTACATGGCTAACACAGAGTCTTCCCGGGCCAAGGCCCGGTCCCAGAGTGCACCGAAGCAAAGGCCAGACTCTTTTGAGAGGCAGCCGAGCCGGCGAAGGGTTTCGGTGGAAGGAAGGAATGTGCCTAGGCCTGTGAGGATGCAGAGGTCTTCTTCACATGTGGGTGCCACTGCCCATAACTACCAGTATCCATGGTCTATCAAGCTTGACAAGTCTAATGTTTCACTCAAAGAAAGTGAGTGTGGCTCTTCAAGCACAGTGCTCACCAATACTAACTACTGCAGATCTCTTGTTGCTTATGATGTGAGTGCCTTATCATTCTCCTATTGA 1407 0.4769 MGKTSKWIRNILTGKKDKAANLNSSNGTENPTTPISTTPKEKRRWSFRRSSATSTSPASKELNSAESNVAATSMTVQQQQQPVIDAENIEQKKHAMAVAAATAAAADAAVAAAQAAAAVIRLTSGSKGTASCTEEAAAIKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQAKATLRGMQALVTAQARARAERIRMALEENPNQRQSTHRKLAQDNLFRDLYDEMDMSLEENIKIVEMDVCESKFDTRRRNSSNPNPSSHRDRSSDHRFSTYYSSNGSYSKEESCRVSPAPSALTELSPRACSGHFEDCSLSTAQSSPKYYSAISKPDDSSKLPFAFPRPAYAESMAYDYPLFPNYMANTESSRAKARSQSAPKQRPDSFERQPSRRRVSVEGRNVPRPVRMQRSSSHVGATAHNYQYPWSIKLDKSNVSLKESECGSSSTVLTNTNYCRSLVAYDVSALSFSY 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0386 468 MobiDBLite consensus disorder prediction 249 289 - -
Glsi13g0386 468 Pfam Protein of unknown function (DUF4005) 338 397 IPR025064 -
Glsi13g0386 468 ProSiteProfiles IQ motif profile. 134 162 IPR000048 GO:0005515
Glsi13g0386 468 MobiDBLite consensus disorder prediction 365 382 - -
Glsi13g0386 468 MobiDBLite consensus disorder prediction 49 67 - -
Glsi13g0386 468 ProSiteProfiles IQ motif profile. 158 185 IPR000048 GO:0005515
Glsi13g0386 468 MobiDBLite consensus disorder prediction 273 289 - -
Glsi13g0386 468 Gene3D - 133 188 - -
Glsi13g0386 468 Pfam IQ calmodulin-binding motif 136 154 IPR000048 GO:0005515
Glsi13g0386 468 Pfam IQ calmodulin-binding motif 161 177 IPR000048 GO:0005515
Glsi13g0386 468 MobiDBLite consensus disorder prediction 17 40 - -
Glsi13g0386 468 PANTHER IQ-DOMAIN 5-RELATED 1 396 - -
Glsi13g0386 468 MobiDBLite consensus disorder prediction 365 413 - -
Glsi13g0386 468 MobiDBLite consensus disorder prediction 383 398 - -
Glsi13g0386 468 SMART iq_5 156 177 IPR000048 GO:0005515
Glsi13g0386 468 SMART iq_5 133 155 IPR000048 GO:0005515
Glsi13g0386 468 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0386 Glsi-ChrGlsi13 22162147 22165226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0386 1 462 IQD Protein Family AT4G14750 45.963 8.24e-106 320