Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0384 ATGGATATTCCACCACTTTCCGCCAATGCCTGTGGCTTCTATGGCTCTTCTGCAAACGACGACCTCTGCTCCAAGTGTTACCGAGATGTTCTCACCGAGAAGATGGCTCTCTTTTCAGTAGATGAAGATTCAAAGGGTGAAGAAACCAAGATCGATGATTCCGTTGGTGTTGCTGATAAAGAATCTTGTGCTTCGGAGATTCCGGAGAAGAAGAGGTGCAAGAGTTGCAACAGGAAGGTCGGACTGACGGGGTTCGAGTGCCGTTTTGGGGACGTGTTCTGCGGAAGGCATAGATACCCAGAAGAGCATGCATGCACTGTGGACTTGAAGCACATTGGTCGCCAACTTTTGATCAAACAGAACCCACTTTACAGGGGTGATAAGTTGGAATGGAAACTCTAG 402 0.4826 MDIPPLSANACGFYGSSANDDLCSKCYRDVLTEKMALFSVDEDSKGEETKIDDSVGVADKESCASEIPEKKRCKSCNRKVGLTGFECRFGDVFCGRHRYPEEHACTVDLKHIGRQLLIKQNPLYRGDKLEWKL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0384 133 SMART AN1_Zf_4 73 110 IPR000058 GO:0008270
Glsi13g0384 133 SUPERFAMILY AN1-like Zinc finger 60 127 IPR035896 -
Glsi13g0384 133 ProSiteProfiles Zinc finger AN1-type profile. 67 113 IPR000058 GO:0008270
Glsi13g0384 133 Gene3D - 2 50 - -
Glsi13g0384 133 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 8 34 - -
Glsi13g0384 133 ProSiteProfiles Zinc finger A20-type profile. 1 35 IPR002653 GO:0003677|GO:0008270
Glsi13g0384 133 Pfam A20-like zinc finger 8 28 IPR002653 GO:0003677|GO:0008270
Glsi13g0384 133 Gene3D - 51 126 IPR035896 -
Glsi13g0384 133 Pfam AN1-like Zinc finger 73 106 IPR000058 GO:0008270
Glsi13g0384 133 PANTHER AN1-TYPE ZINC FINGER PROTEIN 5 130 - -
Glsi13g0384 133 SMART A20_3 4 28 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0384 Glsi-ChrGlsi13 22109337 22109738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0384 6 130 C2H2 Transcription Factor Family AT3G52800 37.013 6.96e-25 91.7