Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0383 ATGAAGGCGAGAATGGGCCGTACATGTTGTGTAGAAACATCAAATCGAGACAAGGCCTGGATTGGCCCATTGCCTGGGGTTGGGCTGCCACCAAGGAAGAGAGAGCACCACCACAGACATGAACACTCCTACAGAGACTCCTCCTCCTCCTCTTCCTCTTCCTATCTAAGGGAAACCCTGAACCTGGCGGAGGCACCATGTATTTCACTCGGTGGTGGTGGTGCTGCCATGGACGAAACTGCTCTTAGGGCTAGGCATCGACTCCAGCAGAAGCTTGGACACTTCTATTCCTCCTTCAGGTCAAGTTCTAATGATGCAGCAAATGAAGGAAAAGTGATCAATCAAAGCACACAAGAGAAGAAGGATAAAGGTTTAGGGAAGAAGTTATTGGAAAGGTCATGGTTATTGCGTCTGACCAGATCATACAAAAAAGAGAGAAAAGTTTGTGCCGTTTGCCTGGAAGATTTCCGAGAGCAGGAGGAGGTTATGAACCTTTCTTGTTCGCACAAGTACCATTCAGCGTGCCTTCTTCCCTGGCTTGCAGCTCATCCCCATTGTCCCTATTGTAGAACCCCAGTTCAGTTCTGA 588 0.4864 MKARMGRTCCVETSNRDKAWIGPLPGVGLPPRKREHHHRHEHSYRDSSSSSSSSYLRETLNLAEAPCISLGGGGAAMDETALRARHRLQQKLGHFYSSFRSSSNDAANEGKVINQSTQEKKDKGLGKKLLERSWLLRLTRSYKKERKVCAVCLEDFREQEEVMNLSCSHKYHSACLLPWLAAHPHCPYCRTPVQF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0383 195 SUPERFAMILY RING/U-box 148 194 - -
Glsi13g0383 195 Pfam Ring finger domain 148 190 IPR001841 -
Glsi13g0383 195 SMART ring_2 149 189 IPR001841 -
Glsi13g0383 195 PANTHER SI:CH211-59O9.10 143 194 - -
Glsi13g0383 195 MobiDBLite consensus disorder prediction 102 124 - -
Glsi13g0383 195 CDD RING-H2_PA-TM-RING 148 190 - -
Glsi13g0383 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 194 IPR013083 -
Glsi13g0383 195 MobiDBLite consensus disorder prediction 20 52 - -
Glsi13g0383 195 ProSiteProfiles Zinc finger RING-type profile. 149 190 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0383 141 190 C3H Transcription Factor Family AT3G58720 46.000 2.95e-11 58.9