Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0379 ATGAACGCCGGCACCGCCACTTTCCGCTCCATTCTCGACAAACCCCTCAACCAGCTCACCGAGGATGACATTTCCCAGCTCACCCGCGAAGACTGTCGTAGGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCTTTGCTCGACCCCGCCGACGACGATTCCGGCGCCGGGACTATCAGGAGATTCGCCTTTGTTTCTGCTGAAGAAGATACCCCACCTGGGAATCTGGATGTCACTGCTGTAAGTGGTGCTGCTGATGTTCCCGGAGTTGATGCCATGGCCTCAGGGTCTGCTGAAGAGCCGGCTTCTTATGCTGCTGAAGAGCTTCCCAAATCTGGTTCATCTGGAGAAAAACCTACGGGTTCTGAAACAAATGAGAAGGTCGTCAGTCCCAGAGGGTGTGCAACTAGTGAATCACTTGAGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTATATGATGGAGTGCCACCTGATAAGCCATATGTGGATTTGCAGGCACGAGCAATCATGCAGCTTGCAGCAAGTCCAGTCCATTTGACTCAAGATGATCCATTCAATAGAAGTACAGCAGTCTGGCCTTCTGGCCACTTGCAGATGGATAAAGAAGCCCTCGTCCCAATTTATAGCAGTAGAACAATTCCTCAGGTTGCTCAAGCAGATAAGATGGTGGAATATCCTTTGCATTACAGGGAGAAAGGGAACACAGCTCGTGATGCTGATGTAGAGGGTCAGACAAGCAGAAAAGTGTTGCTGCAGCGATATCTGGAAAAGAAAAAAGACAGGGGAAGATTAAAGAGCAAAAAATTTACAGGAATACCTTCTTCTAACTTTGAAGTGTATTTAAACCATCAAGCGAAGGCTCATGCCTCAAATGGGAATTCTAGCCGCAGTAGCACAGGCTCTCCACCACAGCCTAGACTGCCTCAAGCTTTCAGTGGCTCAGCTGACAACCAGCCAAAGATTGCCCTCCCTGTTGATCTCAATCACAAAGATTTTCAAGAATGCTAA 1059 0.4825 MNAGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGAGTIRRFAFVSAEEDTPPGNLDVTAVSGAADVPGVDAMASGSAEEPASYAAEELPKSGSSGEKPTGSETNEKVVSPRGCATSESLEQMTIFYCGKVNVYDGVPPDKPYVDLQARAIMQLAASPVHLTQDDPFNRSTAVWPSGHLQMDKEALVPIYSSRTIPQVAQADKMVEYPLHYREKGNTARDADVEGQTSRKVLLQRYLEKKKDRGRLKSKKFTGIPSSNFEVYLNHQAKAHASNGNSSRSSTGSPPQPRLPQAFSGSADNQPKIALPVDLNHKDFQEC 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0379 352 MobiDBLite consensus disorder prediction 130 149 - -
Glsi13g0379 352 MobiDBLite consensus disorder prediction 304 337 - -
Glsi13g0379 352 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 299 IPR040390 -
Glsi13g0379 352 MobiDBLite consensus disorder prediction 304 333 - -
Glsi13g0379 352 Pfam tify domain 156 191 IPR010399 -
Glsi13g0379 352 MobiDBLite consensus disorder prediction 106 149 - -
Glsi13g0379 352 SMART tify_2 151 192 IPR010399 -
Glsi13g0379 352 ProSiteProfiles Tify domain profile. 151 186 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0379 1 307 Tify Gene Family AT4G14720 46.624 2.09e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi13g0379 tify 2.3e-11 No_clan