Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0361 ATGGAGGAGAAGGCGGAGATGGAGAAACACGATTACTGCTTCGAGTGTCTTGAACTTCGAATCAAATCCGATTTCTCGGACCAACTCGTTTTCAATTATGGCATCTCTAATTCTGCTTTTCCTTTTGGATCCTCAGCTATCGTTCAGATTTCTAGTACTACTGGTGGTGAGGCTTCAGCAGGACAATTCATATTGGTCTACATGCCCAGTGATGAGCAGGATTGTTTCACCAAATACATTAATGAATATATCCAGGATAATGATGAATGCGGTAAAAGTAATTATCCTGATACTACTTTACCTGGAGGAAGTCAATATGACAATGGGGTTAATGGTGGAATTCCAAGAGATGGAATTTCTTCACTCGATTCTGGAAGCAGAAAAGCTTGTTCCAAAATTACAGCTTGTAATCATTCTGGAAGATTTTCTTGCTTGAGGACAATGACTGCACTGGCCCCAATTGCTCACATGGGAATCTCTTCCTTTTATACTTTTGAAGAGGTCGCAGCTGACTTCTTGGCTGGCTCACTAGAAGATCACATATTAGATTCACTTGGTCTCTTGATTGAAGGGAAAGCATCAGGGTGGGACAGCATAAACTTCCTTAATTTAATTGGGTTGCCATCATTTGAGGAAGATACTTTTCCAGGTTCCTTGAGGCATCCAAACATAGCTCCTGTTATTGCAATGTTAAAAGCATCCAATCATGTTAACATGGTGCTTCCAAAGACTCCCTATACCTTGGAAAGTATTCTTCACTATAACCCCAATGCCTTGAAGTCTGACTGGCATAGAAGATTTCTTATATATCAGCTACTCTCGGCATTATTATACCTACATAATTTAGGGGTTTCCCATGGGAATATATGCCCATCCAATGTCATGTTGACTAGCTCATTATGGTCTTGGCTGCAATTGTGGAATGAACCTGTAGTGGAATATAATTTAAGGCCGCAAAAAAGTGAAAGAAATAATTTGTCCCTAGCAAAAATTGGCTGTTGCAATGGAGCTTGTCATTCTAATAGCCTTTATGCAGATCTAAAGCTTTCTCCATCAATAGATTGGCATTCTAGCTTTAATCAGTGGTGGAGAGGAGAACTAAGTAATTTTGAGTATTTACTCATCTTAAATAAATTGGCTGGGAGACGGTGGGGGGACCACACATTTCATCCAGTAATGCCTTGGGTAATAGATTTTAGCACAAAACCTGATGATAACTGTGATGCAGGATGGCGAGATTTAAGCAAGAGTAAATGGCGCTTGGCAAAAGGTGACGAACAATTAGATTTTACCTATTCAACATCTGAAATCCCTCATCATGTATCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGCTATAAAGCAAGAAGGCTACCTTTGAGTGTCCTTCGTATGGCTGTTCGTACAGTATATGAGCCTAATGAATATCCTTCTACTATGCAGAGGCTCTACCAATGGACCCCTGATGAGTGCATTCCAGAGTTTTATTGTGATCCCCAAATTTTTAAGTCAATACATGCTGGTATGGTTGATTTGGCTGTACCTTCATGGGCTGAGAGTCCTGAGGATTTCATTAGATTGCATCGTGATGCATTAGAAAGTAACAGGGTCTCTTTGCAACTCCATCATTGGATAGATATCATCTTTGGGTACAAAATGTCAGGCGAGGCAGCTATTTCTGCCAAGAATGTCATGCTTCCTCTATCAGAGCCTATGATGCCAAGATCAACAGGACGTCGACAGCTCTTTACACGGCCACACCCCATTCGTAATGGCACAACTAGAAGAACATGTCATTATACCAATAAAAAAGCCAAGGTTGGGGGCCAAGTGAATGGATTGCAAAATGAGACATCTCTCCTTTCTGAAGCTGGTTATCTGCAGGAATTAGAAGAAGCATCAGCATTTTCTGAACATGTTAGGCATTTGAGTGCTTGTTACCACTACCCATTAAATGCATTACAGGGGAACACCTCATCTTTGGAAGATCCACCAAAGGAGACATTTAGCCATAGTATGTGCAAACTTTCTCAGATTGGGAAAAATTACATGCCGCGGTCAAAAATGGATCTAATTTATTTTCTTCAGCAAATAAAGGAGGAAGATGAATGTTCATTAGGATATCCAGACTTGTTGCTTTGGAGGCAGAAACTATCTTGTTCAAAACTTGTCTCTGAAGATGTTTCAAGGGACATATTTTCTGTTGGTTGTCTCTTAGCAGAACTTCATCTGTGTAGGCCACTCTTTGATTCAACCTCATTGGCAATATACATGGAGGATGGCACCTTACCAGGGTTTCTGCAGGAACTACCTCCTCATGTTAGATTAATTGTCGAAGCATGCATTCAAAAGGATTGGATGAGGAGGCCAACAGCCAAAAATCTTTTGGAATCACCTTATTTTCCAAAGACAATCAAGTCCTCCTACTTATTTCTTGCTCCACTACAGCTTCTGGCTAAAGATGACACCCGTCTTCGTTATGTTGCGAATTTTGCAAAGCAGGGAGCCCTTAAGGCAATGGGCACATTTGCAGCTGAAATGTGTGCTCCTTATTGCTTAACACTTGTAGTGAATTCTGTGAATGACAGTGAAGCTGAATGGGCCTATACACTGCTGAAAGAATTCATAAAGTGCTTAACAGCACAAGCAACCACAGGTGACTCTCATTTAAAGGTTTCTCTCCTACAAGATACTTTTGTACGTGAAATATGGAATCAAGTTGGTAAACAAGCATATCTGGAAACCATTCACCCATTAGTCTTATCAAACTTGTACGTTTCTCCTCATAAAATTTCAGCTGCCTCTGCTTCAGTGCTGCTAATCGGCTCTAGTGAGGAGCTTGGTGTACCCATTACCATCCATCAGACAATCTTGCCCCTGGTTCACTGCTTCGGGAAAGGGCTATGTTCTGATGGAATTGACGTGCTGGTTAGAATTGGTGGTGTTTTTGGGGAATCCTTTATTGTCAAACAGATGCTGCCAATACTAAAAAATGTAGTTCGTTCATTCATTGATGTATCATACATAAATAAGCCTGATCCTGTCCAGAGCTGGAGTGCTTTAGCACTTATTGATTGTATGATGACGTTAGATGGCCTTGTAGCTTTCCTGACAGAAGAGACTATTGTAAAGGAACTACTTGAAGACCAAAGTTGCCTACACATTGGGGTCCTTAAGCAGAAACATCTGGAAATTGCAGTGCTTCAGGTTGCTGCTACTACTTTATTTGCAATTTGTCAGCGGATTGGGCAAGATTTGACAGTGTTGCATATTCTACCAAAACTTAAAGAACTATTTGATGAGCTTGCGTTCTCCCAGGAAATTGCTAAAGGTTCTGCTACGGTTGGCAGAAGCATGAAGGTTTCCAAATTAAAAATTGCTGGGGAGTTACAAACTGAAAGTCGTATGGATCTTGTGTTGCTTCTCTATCCTTCGTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAAAGTTGTGCTACATGGTTGCTTCTTGAACAATTTCTTTTGCGTCGTCATAATTGGAAGTGGGAATATCCAGGAGAATCATCAAAAAATGGTTCAGAAAATACTATTGCCAGAAGACCTACGACTCCCAGGGGCTTTACAAATGAATACAATCCAGCAAAGTTGTTGCTTAATGGGGTTGGGTGGTCAATTCCTCAATCCCAAGGAAGTAGAAGTTCCAAAAACTTGATCCCTCAGAGACGATCATATGAAGTTCAACAAAGTCCAGTGGTAAGGCATGAAGGAATGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACTATCTGGGATGGGCCTGAATTTCTTGGGCGTGTGGGGATTCAGAAAGATGACCTTCCATGGAAGATTAGAGCATCTGTTATATACTCTATACGTGCCCATCATGGAGCAGTGAGGTCTTTAGCTGTTTGTCAAGATGAGTGTACTGTTTTCACTGCAGGAATTGGCCAAGGGTATAAAGGAACTGTTCAGAAGTGGGAAGTGAGCCGAACTAACTGTTTATCTGGCTATTATGGTCATGAGGAGGTTGTGAACGATATTTGTATCTTATCGTCCAGTGGAAGAGTGGCATCTTGTGATGGAACGATTCATATTTGGAACAGTCAAACAGGGAAGCAAATATCAGTATTTGCTGAGTCACAAATTGAATCTGCCCATCTTACAAGCCATTTATCTTCTCCATCGAAGATTAATAGTGACCAGGCTAATGTGCTTAATTTGAATACACTATCAAATGGAATATTGTCTAGTGCCTTTGATTCAAGCCTTTATACTTGTATGCATTTGTTAGACTTTGCTGAAATTCTTGTAGTTGGCACTGGAAATGGTTCTCTCAGGTTCATCGATGTCGCTCAAGGTCAAAAGCTTCATATCTGGAGAGGGGAATCTAATGAATCTAGTTTTCCTTCTCTTATTTCTGCTATTTGCTCCTCTGGAGCTGATAAGATGCAAGCAAGGGGAGTTTCCACTTTGCCATCTTTAATTGCAACTGGACTAAGTTCTGGTCATTGTAAATTATTTGATGCGAAGAGTGGAAATGTCATTGCCTCCTGGCGAGCTCACGATGGATATGTAACAAAGTTGGCAGCACCCGAGGACCATCTACTCATTTCCAGCTCTCTTGACAGAACTTTACGAATCTGGGACTTAAGGATGAATTTGCCATCACAGCCCATCATTTTCAGAGGACATTCAGATGGCATATCCAGTTTCTGCATTTGGGGCCAAGATGTTATTTCAATTTCCAGAAATAGGATTGGGCTTCTCTCCTTGTCTAAATCTGCTGATGAAACAGATGGACTGAATTACATTATTCCTCAGAAACTCTACGTATCAGATAATGGATCAAGAAGCTTGTCAGCATTATCAAGTATTAGTATCCTCCCTTTCTCTCGTTTGTTTCTTGTTGGAACAGAAGATGGTTATCTCAGGATCTGTTGTTAA 4971 0.4092 MEEKAEMEKHDYCFECLELRIKSDFSDQLVFNYGISNSAFPFGSSAIVQISSTTGGEASAGQFILVYMPSDEQDCFTKYINEYIQDNDECGKSNYPDTTLPGGSQYDNGVNGGIPRDGISSLDSGSRKACSKITACNHSGRFSCLRTMTALAPIAHMGISSFYTFEEVAADFLAGSLEDHILDSLGLLIEGKASGWDSINFLNLIGLPSFEEDTFPGSLRHPNIAPVIAMLKASNHVNMVLPKTPYTLESILHYNPNALKSDWHRRFLIYQLLSALLYLHNLGVSHGNICPSNVMLTSSLWSWLQLWNEPVVEYNLRPQKSERNNLSLAKIGCCNGACHSNSLYADLKLSPSIDWHSSFNQWWRGELSNFEYLLILNKLAGRRWGDHTFHPVMPWVIDFSTKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRTVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFKSIHAGMVDLAVPSWAESPEDFIRLHRDALESNRVSLQLHHWIDIIFGYKMSGEAAISAKNVMLPLSEPMMPRSTGRRQLFTRPHPIRNGTTRRTCHYTNKKAKVGGQVNGLQNETSLLSEAGYLQELEEASAFSEHVRHLSACYHYPLNALQGNTSSLEDPPKETFSHSMCKLSQIGKNYMPRSKMDLIYFLQQIKEEDECSLGYPDLLLWRQKLSCSKLVSEDVSRDIFSVGCLLAELHLCRPLFDSTSLAIYMEDGTLPGFLQELPPHVRLIVEACIQKDWMRRPTAKNLLESPYFPKTIKSSYLFLAPLQLLAKDDTRLRYVANFAKQGALKAMGTFAAEMCAPYCLTLVVNSVNDSEAEWAYTLLKEFIKCLTAQATTGDSHLKVSLLQDTFVREIWNQVGKQAYLETIHPLVLSNLYVSPHKISAASASVLLIGSSEELGVPITIHQTILPLVHCFGKGLCSDGIDVLVRIGGVFGESFIVKQMLPILKNVVRSFIDVSYINKPDPVQSWSALALIDCMMTLDGLVAFLTEETIVKELLEDQSCLHIGVLKQKHLEIAVLQVAATTLFAICQRIGQDLTVLHILPKLKELFDELAFSQEIAKGSATVGRSMKVSKLKIAGELQTESRMDLVLLLYPSFASLLGIEKLRQSCATWLLLEQFLLRRHNWKWEYPGESSKNGSENTIARRPTTPRGFTNEYNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRSYEVQQSPVVRHEGMSYQMNHEPWFWFPSPATIWDGPEFLGRVGIQKDDLPWKIRASVIYSIRAHHGAVRSLAVCQDECTVFTAGIGQGYKGTVQKWEVSRTNCLSGYYGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQISVFAESQIESAHLTSHLSSPSKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHLLDFAEILVVGTGNGSLRFIDVAQGQKLHIWRGESNESSFPSLISAICSSGADKMQARGVSTLPSLIATGLSSGHCKLFDAKSGNVIASWRAHDGYVTKLAAPEDHLLISSSLDRTLRIWDLRMNLPSQPIIFRGHSDGISSFCIWGQDVISISRNRIGLLSLSKSADETDGLNYIIPQKLYVSDNGSRSLSALSSISILPFSRLFLVGTEDGYLRICC 1656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0361 1656 Gene3D - 1490 1656 IPR015943 GO:0005515
Glsi13g0361 1656 PANTHER GH12955P 8 1656 - -
Glsi13g0361 1656 SUPERFAMILY Protein kinase-like (PK-like) 218 301 IPR011009 -
Glsi13g0361 1656 Gene3D BEACH domain 352 591 IPR036372 -
Glsi13g0361 1656 SUPERFAMILY WD40 repeat-like 1296 1654 IPR036322 GO:0005515
Glsi13g0361 1656 Gene3D Transferase(Phosphotransferase) domain 1 718 810 - -
Glsi13g0361 1656 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1527 1560 - -
Glsi13g0361 1656 SMART Beach_2 359 591 IPR000409 -
Glsi13g0361 1656 Pfam Protein kinase domain 217 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0361 1656 Gene3D Transferase(Phosphotransferase) domain 1 212 351 - -
Glsi13g0361 1656 Pfam WD domain, G-beta repeat 1341 1376 IPR001680 GO:0005515
Glsi13g0361 1656 Pfam WD domain, G-beta repeat 1522 1558 IPR001680 GO:0005515
Glsi13g0361 1656 Pfam Beige/BEACH domain 361 571 IPR000409 -
Glsi13g0361 1656 CDD Beach 360 591 IPR000409 -
Glsi13g0361 1656 SUPERFAMILY Protein kinase-like (PK-like) 728 828 IPR011009 -
Glsi13g0361 1656 ProSiteProfiles BEACH domain profile. 347 610 IPR000409 -
Glsi13g0361 1656 ProSiteProfiles Trp-Asp (WD) repeats profile. 1527 1560 IPR001680 GO:0005515
Glsi13g0361 1656 SMART WD40_4 1421 1458 IPR001680 GO:0005515
Glsi13g0361 1656 SMART WD40_4 1339 1376 IPR001680 GO:0005515
Glsi13g0361 1656 SMART WD40_4 1520 1558 IPR001680 GO:0005515
Glsi13g0361 1656 SMART WD40_4 1293 1336 IPR001680 GO:0005515
Glsi13g0361 1656 SMART WD40_4 1621 1656 IPR001680 GO:0005515
Glsi13g0361 1656 SMART WD40_4 1461 1517 IPR001680 GO:0005515
Glsi13g0361 1656 ProSitePatterns Trp-Asp (WD) repeats signature. 1545 1559 IPR019775 -
Glsi13g0361 1656 Gene3D - 1271 1489 IPR015943 GO:0005515
Glsi13g0361 1656 SUPERFAMILY BEACH domain 348 591 IPR036372 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0361 Glsi-ChrGlsi13 21535660 21546303 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Glsi13g0361 Beach 1.4e-46 No_clan