Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0341 ATGGCCATTTCGTTGAGAGACTTGTTTTACACGTTCTTCCAAATCTTGTATCAGGTAGTGATCCTGGGAACCATATATTTGAAGGGCGACTCAGTCTTGCACGCTGATGAGGAGCAGAAGCAAACCATCGTCTTTAACGCTTGGGTTCTCTGCCAAGCTTCCTTGTTTACTAGTAGTGATATCAGTGCCAGCAACGTTGAGAATAAAGACCATTACAAGCAAAACCTGTGTGTTCGGATTGGACTAATAATTATGGTAGTGCTTATGTTGGGTTTGGTCAATGTTGCAGCAGGGATGAGTGTTTTGAGATGGGATCAATGGGGTGCCTGCATAGCAATTGGAGCTACGCCCTGGTTAATTGCAGGGGTTTATTCTCAATTGCTGAAGCTTCTGAAGTTTTCATTTCCCAGAAACGCAGACCAAGACTATTTATATACTTGTTTCGATGGTAGATTCGTCTGTCATTCCAAATATACCACCGAGGTTTTCCCTCCCTGGAAGTTGGTTTTCCTCTACCCTGATCTCGTTTCTCTCAACGTTCTTCTTCCCTCTAATTTCTATCAGCCCATCTCTCATCTTTGTACAACGTACCCAGTTGCAAGGGTCACCCTTGTTAGCAGATTCACCTCTCACTCTCATCTTTCTCTCCCCTGCCATAATATCCCAGCTCTATTTGATCTTTCCCTTGCGTTGTTCACCCCCATCTTCATGCCTTCATGA 720 0.4417 MAISLRDLFYTFFQILYQVVILGTIYLKGDSVLHADEEQKQTIVFNAWVLCQASLFTSSDISASNVENKDHYKQNLCVRIGLIIMVVLMLGLVNVAAGMSVLRWDQWGACIAIGATPWLIAGVYSQLLKLLKFSFPRNADQDYLYTCFDGRFVCHSKYTTEVFPPWKLVFLYPDLVSLNVLLPSNFYQPISHLCTTYPVARVTLVSRFTSHSHLSLPCHNIPALFDLSLALFTPIFMPS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0341 239 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 125 IPR023298 -
Glsi13g0341 239 Pfam Cation transporting ATPase, C-terminus 4 123 IPR006068 -
Glsi13g0341 239 PANTHER CATION TRANSPORTING ATPASE 11 126 - -
Glsi13g0341 239 Gene3D - 7 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0341 Glsi-ChrGlsi13 20739151 20740897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0341 12 133 Primary Pumps ATPases AT5G57110 32.414 1.41e-11 62.0