Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0310 ATGACGGTTGGCAACACTTTGGTGGAGAAACGAGCCTGGGGTGCCAGTGGTTGCGTGAACCTGCTTTTACCAAGATTCCCTCCTCATTTATCTATTCGCCCAACTTCTTGCAAACCCATTTCTCCCTTAACTAGAAGATTTTCAGTTGTTTTGGCCATGGATGGTCCAAAAGTTAGTCTGCCTAAGGAAATGCCCTTGGGGATAGAAGAAATGACTGAGGAAGAATATGCTTATCAGTCTAACTTACTTCAAGAATTCTCTAGTATCTCCTCCATTGACAAGGCATGGATTTTTAACTCTGACAGTGCACTGGCCTCTCAGGGAATGTTTTGTATTAGCCAACCAAATCTTCTGGAAAACAAGAGAAAACAGTTTATACTATCCTCTACAATACTAAAAGAAAGTAACAGTTCGGTAAAATTTCAATGGGCTCCATTTCCCATAGAGATGTCTGGAGTGTCTACAATTGTTCCATCACCCTCTGGCTCAAAATTTCTGGTAGTTCGAAATCCCGAGAATGAAGGTCCTTCTCTTTTTCAAATTTGGAGTTCATCTCACATGGAGAGGGAGTTCCATATCCCCCAATCAATGCATGGTTCAGTATATACTGATGGATGGTTTGAGGGAGTCTCCTGGAATTTTGATGAAACTTCTATAGCATATGTAGCTGAACAGCCATCCCCTGCGAAGCCCACGTTCAATGATCTGGGCTACAAGAAAGATAATTTGACAGACAAAGATTGTGGTAGCTGGAAAGGTCAAGGGGATTGGGAGGAGGACTGGGGAGAAACATATGCAGGAAAGAGGCAACCTGCACTATTTGTTATAAGAATTGACAGTGGAGAGGTACAAGCTGTGAAAGGAATTGACAAATCTTTGAGTGTTGGACAAGTTGTATGGGCTCCATCTACTGAAGGCTCAGCACAATATTTGGTTTTTGTTGGATGGTCATCTGAGACAAGAAAACTTGGTATTAAATATTGCTATAACAGGCCTTGTGCATTATATGCTGTTAGAGCTCCACACCATGAGTCAAAAGCTAATGAAACTAAGATTTATTCAACTGAAGATGTTCAGGCTCTTGAACTAAATCAAACGATAAGTAGCGCCTTCTTTCCACGGTTCAGCCCCAATGGGAAGTTCCTTGTGTTTTTATCGTCAAGAAGTTCAGTGGATTCTGGAGCCCACTCTGCAACAAATTCACTTCATAGAATTGGTTGGCCTACTGATATGAAGGGGTACAAATCTGCAGAAGTTTATGATGTGATTCCCATTGTGATGTGTGCTGAGGATGGTTGCTTCCCTGGGCTTTACTGTCCAAGTATCCTTTGTAATCCATGGCTTTCTGATGGCTGCACTATGATTATAGCCTCTGTCTGGCACAGCAGTCAAGTTTTACTATCTGTGAATGTATTGAGTGGAGAAATATCACGTATCAGCCCTAGCGACTCAAATTTCTCTTGGAGTCTTCTTACTTTGGATGGGAACAATATTCTTGCTGTTTCTAGTAGCCCAGTAGATGTTCCTAAAATCAACTATGGAACCATTGTTGAGAAAGAAACTAATAGTAATGCATGGAGTTGGTCAGATGTATCAAGTCCCATATTCAAATGCTCTGACAAGGTCAGATCTTTGCTGTCATCTCTTCAGTTTAGTGTAATGAAGATCTCAGTGAAAGATGCTTCTGATAGCCTAACAAAAGGTGCTAGTAAGCCTTTTGAAGCTATATTTGTGTCATCAAAAACCAAGAAAAATGATGCCTGTGATCCACTAATTGCAGTCCTTCATGGGGGACCCCACAGTGTCTCATTGTCAAGCTTTTCAAAGTCCTTGGCTTTCTTATCTTCACTTGGATACAGCTTGTTGGTTGTAAACTACAGAGGTTCACTAGGATTTGGTGAGGACGCATTACAATCTCTTCCAGGAAAAATTGGCTCTCAGGATGTCAATGACTCACTCGCTGCCATAGATCATGTTGTTAACTTAGGACTTGCTGATCCATCAAAGATTGCAGTGCTGGGTGGTTCACATGGTGGCTTTCTGACAACCCACTTGATCGGCCAGGCACCAGAGAAGTTTGCCGTGGCAGCTGTGAGAAATCCTGTCTGTAATCTTGCACTGATGGTTGGGACAACAGATATTCCTGACTGGTGCTATGTGGAGGCCTATGGAACCATTGGCAAAGATAGGTATACAGAAGCACCTTCGGTGGAGGATCTGACTCTATTTCATAGCAAATCTCCTATTTCACATCTCTCAAAGGTGAAAACACCGACGCTTTTCCTATTGGGTGCTCAAGATCTTCGTGTACCAGTTACTAATGGATTGCAATATGCAAGGGCTTTAAAGGCCAAAGGAATTGAGGTCAAACTCATAGTGTTTCCCAAGGATGTTCATGCAATTGAAAGGCCACAATCTGACTTTGAAAGCTTCCTTAACATTGGGGTGTGGTTCAAGAAGTATTGTAAATGA 2472 0.4207 MTVGNTLVEKRAWGASGCVNLLLPRFPPHLSIRPTSCKPISPLTRRFSVVLAMDGPKVSLPKEMPLGIEEMTEEEYAYQSNLLQEFSSISSIDKAWIFNSDSALASQGMFCISQPNLLENKRKQFILSSTILKESNSSVKFQWAPFPIEMSGVSTIVPSPSGSKFLVVRNPENEGPSLFQIWSSSHMEREFHIPQSMHGSVYTDGWFEGVSWNFDETSIAYVAEQPSPAKPTFNDLGYKKDNLTDKDCGSWKGQGDWEEDWGETYAGKRQPALFVIRIDSGEVQAVKGIDKSLSVGQVVWAPSTEGSAQYLVFVGWSSETRKLGIKYCYNRPCALYAVRAPHHESKANETKIYSTEDVQALELNQTISSAFFPRFSPNGKFLVFLSSRSSVDSGAHSATNSLHRIGWPTDMKGYKSAEVYDVIPIVMCAEDGCFPGLYCPSILCNPWLSDGCTMIIASVWHSSQVLLSVNVLSGEISRISPSDSNFSWSLLTLDGNNILAVSSSPVDVPKINYGTIVEKETNSNAWSWSDVSSPIFKCSDKVRSLLSSLQFSVMKISVKDASDSLTKGASKPFEAIFVSSKTKKNDACDPLIAVLHGGPHSVSLSSFSKSLAFLSSLGYSLLVVNYRGSLGFGEDALQSLPGKIGSQDVNDSLAAIDHVVNLGLADPSKIAVLGGSHGGFLTTHLIGQAPEKFAVAAVRNPVCNLALMVGTTDIPDWCYVEAYGTIGKDRYTEAPSVEDLTLFHSKSPISHLSKVKTPTLFLLGAQDLRVPVTNGLQYARALKAKGIEVKLIVFPKDVHAIERPQSDFESFLNIGVWFKKYCK 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0310 823 Gene3D - 335 392 IPR015943 GO:0005515
Glsi13g0310 823 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 69 822 - -
Glsi13g0310 823 SUPERFAMILY DPP6 N-terminal domain-like 150 507 - -
Glsi13g0310 823 Pfam Prolyl oligopeptidase family 606 822 IPR001375 GO:0006508|GO:0008236
Glsi13g0310 823 SUPERFAMILY alpha/beta-Hydrolases 586 822 IPR029058 -
Glsi13g0310 823 Pfam WD40-like Beta Propeller Repeat 370 394 IPR011659 -
Glsi13g0310 823 FunFam Acylamino-acid-releasing enzyme 562 822 - -
Glsi13g0310 823 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 72 345 IPR045550 -
Glsi13g0310 823 ProSitePatterns Prolyl endopeptidase family serine active site. 651 681 IPR002471 GO:0004252|GO:0006508
Glsi13g0310 823 Gene3D alpha/beta hydrolase 570 821 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0310 Glsi-ChrGlsi13 19688205 19701723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0310 590 806 Carbohydrate Esterase AT5G36210 27.650 1.54e-18 88.6