Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0309 ATGTTATTTTTTGGTCATATAATTTGCAGTAGAAGCCTCTCAGCTGTTTTAGCCATGGATGGTTCAAAACCCAGTCCACATAAGGAAATGCAATTGGGGATAGATGCTATAACTGAGGAAGAATATACTTCTCAGTCTAACTTACTTCAAGAATTCACTAATATCTCCAACATTGACAAGGCATGGATTTTTAAGTCTGACAGCTCACTGAGCTTGCAGGGAATGTTTTTTATTAGCAAGCCAAATCTTCTGGAAAACAAGAGAAGAAAGTTCATTCTATCCTCTACCATATTCAAAGAAAGCAACGGTTCTGTAAAATTTCAATGGGCTCCATTTCCCATAGAGATGTATGGAGTTTCTATAATTGTTCCGTCACCTTCTGGCTCAAAACTTCTAATAGTTCGAAATCCTGAGAATGAAGGTCCTTCTTGCTTTGAAATTTGGAGTTCATCTCACATGGAGAAGGAGTTCCATATCCCCCAATCAGTGCATGGTTCAGTATATACTGATGGATGGTTTGAGGGAATCTCCTGGAACATGGCTGAAACTTTTATAGCATATATAGCTGAAGTGCCCTCTCCTGCAAAGCCCACATTCAAGGACCAGGGTTACAGGAAGGGTAGTTTTGCAGACAAGGATTGTGGTAGCTGGAAAGGTCAAGGGGATTGGGAAGATGACTGGGGAGAAACTTATGCTGGAAAGAGGCAACCTGCACTTTTTGTTCTCAACGTCAACAGTGGCGAGGTACATGCTGTCAAGGGAATTGACAAATCTTTGAGTGTTGGACAAGTTGTGTGGGCTCCATCTACAGAAGGCTCAGAACAATATCTAGTTTTTGTTGGTTGGTCATCTGAGGCAAGAAAACTTGGTATTAAGTACTGCTCTAACAGGCGTTGTGCATTATATGCTGTTAAAGCACCACATCATGGGTCAAAAGCTAATGAACCTGAGCTCCAACATAGCACAACTGCTGAGACGCATGCTGTTAACCTTACACATAGCATAAGTAGTGCCCTCTTTCCACGATTCAGCCCGGATGGAAAGTTCCTTGTGTTTTTATCTGCAAGAAGTTCTGTGGATTCTGGAGTCCACCTTGCAACAAATTCACTTCATAGAATTGATTGGCCAACTGATGGGAAACTTTACCAACATGCAAAAATTTATGATATCATTCCGGTTGTGATGTGTGCTGAGGATGGTTGCTTTCCTGGGCTTTACTGTACAAGTATCCATCATAACCCATGGCTTTCTGATGGGTGCACTATGATTATATCATCCGTCTGGCATAGCAGTCAAGTTTTTCTCTCAGTGAATGTGTTGAGCACGGAAATATTACGTATCAGCCCAGCAGACTCAAATTTCTCATGGAATCTTCTTATGCTGGATGGGAACAATATTATTGCTGTTTCCAGTAGTCCAGTAGATATTCCTCAAATCAAGTATGGAATGGTCATCGAGAAGGAAAGTAAAATTAGTGCATGGAGTTGGTCCACTATATCTAGCCCAATATTTAGATGCTCTGAAAAGGTTGGATCGTTGCTGTCCGCTCTCCAGTTCTGTATAGTGAAGATCTCAGCCAAGGATGCTGTTGATAGCCTTACAAAAGGTGCTAGTAAACCTTATGAAGCTATATTTGTGTCATCTAACACCAAGAAAAATGATGTATGTGATCCATTGATTGTGGTCCTTCATGGGGGTCCACATGATGTCTCATTATCATCCTTTTCAAAGTCTTTGGCTTTTCTAGCTTCAGTTGGATTCAGCTTACTAATTGTAAATTACAGAGGTTCATTAGGATTTGGTGAGGAAGCATTGCAATCTCTTCCAGGCAAAGTTGGGTCTCAGGATGTCAATGATGTTCTCTCTGCTATAGATCATGTCATCAACTTGGGTCTTGCCAATCCTTCTAAAATTACAGTGACGGGTATTTCACATGGTGGCTTTCTAACGACCCACTTGATTGGCCAGGTGCCAGGGAAGTTTGTTGCAGCTGCAGCGATCAATCCTGTTTGTAACTTAGCACTGATGATTGGTACAACTGATATTCCTGATTGGTGCTACGTAGAGGCCCATGGAACCATTGCCAGAACTCATTATACTAAAGAACCCTCTGCAGAAGACTTGACTCTTTTTTATAGCAAGTCTCCTATTTCACACCTCCCAAAGGTGAAAACACCAACGCTTTTCCTATTAGGTGCTCAAGATCTCCGTGTTCCAATTCCTGATGGGTTGCAATATGCACGGGCTTTAAAGGAGAAAGGAGTTGAGGTCAAAATCATTATGTTTCCCAATGATGTTCACGCACTTGAAAGACCACAATCTGACTTTGAATGCTTCCTTAACATTGGGGTGTGGTTCAAGAAGTTTTGCAAATGA 2376 0.4146 MLFFGHIICSRSLSAVLAMDGSKPSPHKEMQLGIDAITEEEYTSQSNLLQEFTNISNIDKAWIFKSDSSLSLQGMFFISKPNLLENKRRKFILSSTIFKESNGSVKFQWAPFPIEMYGVSIIVPSPSGSKLLIVRNPENEGPSCFEIWSSSHMEKEFHIPQSVHGSVYTDGWFEGISWNMAETFIAYIAEVPSPAKPTFKDQGYRKGSFADKDCGSWKGQGDWEDDWGETYAGKRQPALFVLNVNSGEVHAVKGIDKSLSVGQVVWAPSTEGSEQYLVFVGWSSEARKLGIKYCSNRRCALYAVKAPHHGSKANEPELQHSTTAETHAVNLTHSISSALFPRFSPDGKFLVFLSARSSVDSGVHLATNSLHRIDWPTDGKLYQHAKIYDIIPVVMCAEDGCFPGLYCTSIHHNPWLSDGCTMIISSVWHSSQVFLSVNVLSTEILRISPADSNFSWNLLMLDGNNIIAVSSSPVDIPQIKYGMVIEKESKISAWSWSTISSPIFRCSEKVGSLLSALQFCIVKISAKDAVDSLTKGASKPYEAIFVSSNTKKNDVCDPLIVVLHGGPHDVSLSSFSKSLAFLASVGFSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHVINLGLANPSKITVTGISHGGFLTTHLIGQVPGKFVAAAAINPVCNLALMIGTTDIPDWCYVEAHGTIARTHYTKEPSAEDLTLFYSKSPISHLPKVKTPTLFLLGAQDLRVPIPDGLQYARALKEKGVEVKIIMFPNDVHALERPQSDFECFLNIGVWFKKFCK 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0309 791 Pfam Prolyl oligopeptidase family 574 788 IPR001375 GO:0006508|GO:0008236
Glsi13g0309 791 SUPERFAMILY DPP6 N-terminal domain-like 115 478 - -
Glsi13g0309 791 FunFam Acylamino-acid-releasing enzyme 530 790 - -
Glsi13g0309 791 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 38 310 IPR045550 -
Glsi13g0309 791 SUPERFAMILY alpha/beta-Hydrolases 558 789 IPR029058 -
Glsi13g0309 791 Gene3D alpha/beta hydrolase 539 789 IPR029058 -
Glsi13g0309 791 ProSitePatterns Prolyl endopeptidase family serine active site. 619 649 IPR002471 GO:0004252|GO:0006508
Glsi13g0309 791 Pfam WD40-like Beta Propeller Repeat 340 362 IPR011659 -
Glsi13g0309 791 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 38 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0309 Glsi-ChrGlsi13 19650438 19672775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0309 558 774 Carbohydrate Esterase AT5G36210 25.346 9.32e-17 82.8