Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0211 ATGGCTTCTCCTAGTGGTTCTTCTGGTTCTAACTGTGGCTCTGAGGGACACCTGCAGCAGCATATTATGGAGCAGAGGAAGAGGAAGAGGAAGAGAATTCTGTCCAATCGTGAATCCGCACGTCGATCCAGGAGGAAGAAACGGCAATATCTGGATGATCTGATTGGCCAACTGGGTCAACTGAAGAAGGAAAACAATCAAATAATCACAAGCATGGGCATCACCACCCAACTGTACCTAAACATTGAGGCAGAGAATACAATTCTCAGGACTCAGATGGCAGAATTAAGCAACAGATTGCAGTCTCTCAATGAGATCATAGACTACATAAACTCAACCAATTACCTCTTTGATGAGGTTGAGGACAAACAGATAATTGATTTTGGCTTCATGAACCCATGGAATTATCCTATCATGGCCTCTGCTGACATGTTGATGTATTGA 444 0.4347 MASPSGSSGSNCGSEGHLQQHIMEQRKRKRKRILSNRESARRSRRKKRQYLDDLIGQLGQLKKENNQIITSMGITTQLYLNIEAENTILRTQMAELSNRLQSLNEIIDYINSTNYLFDEVEDKQIIDFGFMNPWNYPIMASADMLMY 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0211 147 FunFam BZIP transcription factor 25 77 - -
Glsi13g0211 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 31 46 IPR004827 GO:0003700|GO:0006355
Glsi13g0211 147 Pfam bZIP transcription factor 26 71 IPR004827 GO:0003700|GO:0006355
Glsi13g0211 147 MobiDBLite consensus disorder prediction 23 44 - -
Glsi13g0211 147 MobiDBLite consensus disorder prediction 1 47 - -
Glsi13g0211 147 SUPERFAMILY Leucine zipper domain 28 80 IPR046347 GO:0003700|GO:0006355
Glsi13g0211 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 7 144 - -
Glsi13g0211 147 MobiDBLite consensus disorder prediction 1 18 - -
Glsi13g0211 147 Gene3D - 26 80 - -
Glsi13g0211 147 Coils Coil 79 106 - -
Glsi13g0211 147 SMART brlzneu 24 88 IPR004827 GO:0003700|GO:0006355
Glsi13g0211 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 26 68 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0211 Glsi-ChrGlsi13 11812486 11812929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0211 19 147 bZIP Transcription Factor Family AT4G34590 50.000 1.47e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi13g0211 bZIP_1 1.4e-08 CL0018