Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0157 ATGATCAAATTTCAGTTTCTCCAGTCAGTTTTATGTTTGCTAGTTTCAGTTTCTTATTTGCTAACTTGCTTGGGAGACAATGACATACCTGTTCAATTGAATGATGATGTTCTTGGCCTGATCGTGTTCAAATCCGACCTTCAAGACCATTCTTCTTATCTTGCTTCGTGGAACGAAGACGATGTGAGTCCGTGTTCATGGCGATTCGTGCAATGCAATACTGTGAGTGGAAGAGTTTCAGAGGTTTCATTGGATTACTTGGGCTTATCTGGGAAAATAGGAAGAGGTCTTGAGAAGTTGCAGCATCTGAAGGTATTGTCCCTCTCTCATAACAATTTGACTGGGAGTATTAGTCCAGCACTTGCTCTTTCTAACAGTCTTGAAAGGCTAAACCTCAGTCACAACAGTCTTTCGGGTCCTATTCCCACTTCTTTTGTGAATATGAGTTCAATAAAGTTTCTTGATCTCTCAGAAAATTCATTCTCAGGACAAGTCCCTGACAATTTGTTTGAAAACTGCTTTTCCCTTCGTTACCTTTCTTTAGCTTGGAATATGTTTGAAGGGCAAATTCCTAGCACACTGTCTAGGTGCTCCTTATTGAATAGCCTGAATCTTTCTAATAATCGCTTCGCTGGTAATGTGGACTTCACTGGGATTTGTTCTTTGGAAAGGCTTAGGACTTTGGATCTCTCAAACAATGCCTTCAATGGATATTTACCTGCCGGATTATCAGCCATACATAACTTGAAAGAGATCTTATTGCAGGGTAATCACTTTTCAGGACCATTACCCTCTGATATTGGACTCTGCTTGCATTTGAATAGGTTGGATTTTAGTGATAATATGTTCAGCGGAGCACTACCAGAGTCACTTGGGAGACTTAATTCTTTGACCTCTTGTAGGGCATCGAATAATTTGTTAACCAATGAACTTCCTCAGTGGATTGGTAACATGAAAAGTCTGGAGTATCTTGACCTCTCAAACAATCAGTTCACCGGAAGTATCCCACCTTCAATAGGGGAACTGAAATCATTGAGTTATCTTAGTCTTTCGAATAACAAGCTTGAGGGAAACATTCCATCATCATTGGTTTCTTGTACTAAGTTATCCTTCATCCAGCTCAGAGGTAATGGTTTCAATGGTAGCATACCAGAGGGTTTGTTTGGCCTAGGATTGGAGGAAATAGACTTTTCGAATAATGAGCTGACGGGTTCAATCCCAGAAGGCTCAAGCAGGCTCTTTGAAACTCTTCTCAAATTGGATCTTTCAGAGAACCACCTCCGGGGGAAAATCCCTGCAGAAATAGGTTTTCTTTCAAAGTTAAGATACTTAAATCTATCTTGGAATGATCTACAATCCCAAATGCCTCCAGAATTGGGTCTCCTTCAGAATCTAACAGTTCTAGATCTTCAGAACAATTCCTTATATGGTTCGATTCCAGAGGATCTGTGTGATTCAGGCAATGTAGCCATCCTTCAACTGGATGGAAATTCATTGAACGGGACTATTCCAGTTGATATAGGGAAGTGTACGTCTCTGTACTTGCTGAGTTTGTGTCACAATAATTTGACTGGTTCAATTCCCAAGTCCATGTCAAAGCTGAACAAGCTCGAAGTCCTCAAATTAGAGTTCAATGAACTAAGTGGAGAGATACCACAGGAGCTTGGAATGCTTCAAAATCTTCTTGCAGTGAATATATCATATAACAGTCTGACAGGCAGACTTCCTACAGGTAGTATATTTCAGAACTTAGACAAAAGTTCCTTGGAAGGAAACTTGGGTCTTTGCTCACCCTTGCTGAATGGTCCATGTAAGATGAATGTGCCGAAGCCACTTGTGCTTGATCCAAATGCCTATAACAACCAAATGGGTCCTCATAGGCAAGGAAATGAATCATCTATTCCTAGCATAATCCATCGCCACAGGTTCCTAAGCGTTTCTGCTATTGTAGCAATTTCAGCAGCTTTTGTGATAATATTGGGAGTGATTGCTATTAGCATACTTAACGTCTCTGTGAGGAGAAGGCTAGCATTTGTGGACAATGCTTTGGAAAGCATGTGCTCTAGCTCTTCAAGATCAGGAAGTCCACCCACAGGAAAGCTCATTCTGTTTGATACTGCGTCCTCTCTTGATTGGATCAGCAACCCCGAATCCTTACTCAACAAAGCATCTGAGATTGGAGAAGGAGTGTTTGGAACAGTTCACAAAGTTCCCTTGGGGTCACAAGGTAGAATGGTAGCAATTAAAAGGCTAGTCACTTCAAACTTAATCCAATATTCAGAAGACTTCGACAGGGAAGTTAGAATCCTAGGAAAAGCAAGGCACCCAAATCTAATATCATTGAAAGGATACTACTGGACTCCTCAAATGCAGCTTTTGGTAACTGAGTATGCACCAAATGGTGGCCTGCAAACCAAACTACATGACAGGCATCCTTCAAGTCCACCTCTTTCATGGGCAAATAGATTCAAAATTTTGCATGGAACAGCAAAGGGGCTTGCTCATTTGCATCATTCATTCCGTCCCCCAATTATTCACTACAACATAAAGCCAAGCAATATCTTACTTGACGAGAACTATAACCCCAAGATATCAGATTTTGGGTTGGCTCGGCTTCTGATAAAGCTGGACAGGCATGTGATGAGCAACAGGTTTCAGAGTGCCTTAGGATATGTAGCACCAGAATTAGCATGCCAGAGCTTAAGGGTCAATGAGAAATGTGATATTTATGGTTTTGGGGTGATGATCCTTGAGCTGGTGACTGGTAGGAGGCCAGTGGAATATGGAGAAGATAATGTGCTGATACTGAAAGACCATGTGAGGGTGTTGCTAGAACGAGGGAATGTGTTGGAATGTGTGGATCCAAGCATGAGTGAGTACCCCGAGGATGAGGTACTGCCAGTTCTCAAGTTAGCGTTGGTATGCACCACTCAAATACCTTCGAGCAGGCCTTCTATGGCAGAAGTGGTGCAAATACTTCAGGTCATTAAAACTCCAGTTCCACAAAGAATGGAAATGTTTTGA 3024 0.4163 MIKFQFLQSVLCLLVSVSYLLTCLGDNDIPVQLNDDVLGLIVFKSDLQDHSSYLASWNEDDVSPCSWRFVQCNTVSGRVSEVSLDYLGLSGKIGRGLEKLQHLKVLSLSHNNLTGSISPALALSNSLERLNLSHNSLSGPIPTSFVNMSSIKFLDLSENSFSGQVPDNLFENCFSLRYLSLAWNMFEGQIPSTLSRCSLLNSLNLSNNRFAGNVDFTGICSLERLRTLDLSNNAFNGYLPAGLSAIHNLKEILLQGNHFSGPLPSDIGLCLHLNRLDFSDNMFSGALPESLGRLNSLTSCRASNNLLTNELPQWIGNMKSLEYLDLSNNQFTGSIPPSIGELKSLSYLSLSNNKLEGNIPSSLVSCTKLSFIQLRGNGFNGSIPEGLFGLGLEEIDFSNNELTGSIPEGSSRLFETLLKLDLSENHLRGKIPAEIGFLSKLRYLNLSWNDLQSQMPPELGLLQNLTVLDLQNNSLYGSIPEDLCDSGNVAILQLDGNSLNGTIPVDIGKCTSLYLLSLCHNNLTGSIPKSMSKLNKLEVLKLEFNELSGEIPQELGMLQNLLAVNISYNSLTGRLPTGSIFQNLDKSSLEGNLGLCSPLLNGPCKMNVPKPLVLDPNAYNNQMGPHRQGNESSIPSIIHRHRFLSVSAIVAISAAFVIILGVIAISILNVSVRRRLAFVDNALESMCSSSSRSGSPPTGKLILFDTASSLDWISNPESLLNKASEIGEGVFGTVHKVPLGSQGRMVAIKRLVTSNLIQYSEDFDREVRILGKARHPNLISLKGYYWTPQMQLLVTEYAPNGGLQTKLHDRHPSSPPLSWANRFKILHGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENYNPKISDFGLARLLIKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGVMILELVTGRRPVEYGEDNVLILKDHVRVLLERGNVLECVDPSMSEYPEDEVLPVLKLALVCTTQIPSSRPSMAEVVQILQVIKTPVPQRMEMF 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0157 1007 Gene3D Ribonuclease Inhibitor 36 192 IPR032675 -
Glsi13g0157 1007 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 194 288 - -
Glsi13g0157 1007 CDD STKc_IRAK 726 994 - -
Glsi13g0157 1007 Gene3D Transferase(Phosphotransferase) domain 1 799 1005 - -
Glsi13g0157 1007 Gene3D Phosphorylase Kinase; domain 1 707 797 - -
Glsi13g0157 1007 FunFam Inactive leucine-rich repeat receptor-like protein kinase 314 607 - -
Glsi13g0157 1007 PANTHER OS05G0588300 PROTEIN 338 459 - -
Glsi13g0157 1007 SUPERFAMILY RNI-like 129 552 - -
Glsi13g0157 1007 Gene3D Ribonuclease Inhibitor 318 607 IPR032675 -
Glsi13g0157 1007 Pfam Protein kinase domain 722 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0157 1007 SMART LRR_typ_2 462 486 IPR003591 -
Glsi13g0157 1007 SMART LRR_typ_2 534 558 IPR003591 -
Glsi13g0157 1007 SMART LRR_typ_2 438 461 IPR003591 -
Glsi13g0157 1007 SMART LRR_typ_2 222 246 IPR003591 -
Glsi13g0157 1007 SMART LRR_typ_2 148 172 IPR003591 -
Glsi13g0157 1007 SMART LRR_typ_2 318 340 IPR003591 -
Glsi13g0157 1007 SMART LRR_typ_2 342 366 IPR003591 -
Glsi13g0157 1007 SMART LRR_typ_2 100 125 IPR003591 -
Glsi13g0157 1007 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Glsi13g0157 1007 Gene3D Ribonuclease Inhibitor 195 314 IPR032675 -
Glsi13g0157 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 714 797 - -
Glsi13g0157 1007 ProSiteProfiles Protein kinase domain profile. 720 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0157 1007 Pfam Leucine rich repeat 392 451 IPR001611 GO:0005515
Glsi13g0157 1007 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Glsi13g0157 1007 Pfam Leucine rich repeat 320 378 IPR001611 GO:0005515
Glsi13g0157 1007 ProSiteProfiles Leucine-rich repeat profile. 320 342 IPR001611 GO:0005515
Glsi13g0157 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 193 - -
Glsi13g0157 1007 ProSitePatterns Protein kinases ATP-binding region signature. 726 749 IPR017441 GO:0005524
Glsi13g0157 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 798 1002 - -
Glsi13g0157 1007 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Glsi13g0157 1007 SUPERFAMILY Protein kinase-like (PK-like) 712 997 IPR011009 -
Glsi13g0157 1007 PRINTS Leucine-rich repeat signature 462 475 - -
Glsi13g0157 1007 PRINTS Leucine-rich repeat signature 321 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0157 Glsi-ChrGlsi13 8617725 8620847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0157 25 1004 Receptor kinase-like Gene Family AT3G28040 64.480 0.0 1243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Glsi13g0157 Pkinase 3.2e-42 CL0016