Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0156 ATGTTCATCCTCATTGCTCTTTCCATTTCGCTAGGGCTTTTTCTTCTCTCCTTTCTCTTATCATTCGTTCTACAGTATCATCGATACAACAAGCCCAATCTTTATTCATCCTCCTTCACCCATGGCCCTCCTTCATACCCAATAATTGGTTGCCTTATCTCTTTCTACCAAAGTCGCCATCGTCTCTTAGACTGGTACACTGAACTCTTATCCAAGTCCCCAACCCAAACCATTGTGGTGCAGCGCCTCGGCGCACGCCGTACCGTCGTCACTGCCAACCCTTCCAACGTAGAGTTCATCCTCAAGACCAATTTCAACAACTTTCCTAAAGGCAAACCCTTCACTGAGATTCTTGGGGACCTCCTTGGCTGTGGCATATTCAGTGTAGATGGCGAGTTATGGTCTGCACAGCGCAAATTGGCTAGCCATGAGTTCAGCACGAAGTCACTCAAATTGTTCATCGTCAAGACCCTCGAAGAAGAAGTCCAACAAAGGCTAATCCCTTTGCTAGAATCGGCTTCCCTTACCAACCAGATTGTCGATTTTCAAGAGATATTAAGGAGATTCACATTTGACAGTGTGTGTAAAGTGTCATTGGGAACTGACCCTTGTTGCTTAGACCTGTCACAACCTCTGCCTCCTATGGTTATGGCTTTTGACAGCGCCTCACAAATTAGCGCTATGCGTGCAACAGCCCCAGTGTTTCTGATGTGGAAGATTAAGCGGGCATTGAACATGGGCTCTGAGAAATCACTCAAACAAGCTGTTCAAGTCGTGCACGAGTCAGTCCTCGAGATCATCAGGAACAAGAAGAAAAAAATAAACGATCATGAGAGTGTTGATGAAGATTTGCTGACACGCTTGTTGCTTGCAAGACACGATGAAGTATTAGTTAGAGATCTGGTTATAAGCTTTATAATGGCAGGAAGGGACACAACATCAGCAGCCATGACATGGCTATTTTGGTTGCTATCTAAGCATCCACGCAAAGAGGAAATGATATTAAATGAAGTGAAGTCAGTGTTTGGAGGAAATGGTGATGATGATAAGCTGAAACCATTTGATTATGAAGGTTTGACAGAGATGAGGTTCTTGAAGGCATGCTTATGTGAGTCAATGCGGCTGTACCCGCCGGTGGCGTGGGACTCAAAGCATGCAGTCGACGATGAGTTGTTGCCGGATGGGACGGCCGTGAGGAGAGGGGATAGGGTGACATATTTTCCTTATGGAATGGGGAGGATGGAGGAGTTGTGGGGGAAGGATTGCTATGAGTTTAAACCAGACAGGTGGTTTGATGAACCGGCAGAAGACAATGGGGTGTTGAAATATGTGAGCCCATACAAGTTTCCGGTGTTTCAGGCCGGTCCAAGGGTGTGCCTTGGGAAAGAGATGGCTTTCATTCAGATGAAGTATGTTACTGCTTCAATCCTGAGCCGGTTTCGGATAAAGCCGGTCTCTCTAGACCAGCCGGCTTTTGTTCCTCTATTAACAGCTCACATGGCTGGCGGATTCAAAGTGAGGGTCCAGAAGAAAACTGAAAATGACAGCCCCATGGACGGCGGAGCATAA 1569 0.4653 MFILIALSISLGLFLLSFLLSFVLQYHRYNKPNLYSSSFTHGPPSYPIIGCLISFYQSRHRLLDWYTELLSKSPTQTIVVQRLGARRTVVTANPSNVEFILKTNFNNFPKGKPFTEILGDLLGCGIFSVDGELWSAQRKLASHEFSTKSLKLFIVKTLEEEVQQRLIPLLESASLTNQIVDFQEILRRFTFDSVCKVSLGTDPCCLDLSQPLPPMVMAFDSASQISAMRATAPVFLMWKIKRALNMGSEKSLKQAVQVVHESVLEIIRNKKKKINDHESVDEDLLTRLLLARHDEVLVRDLVISFIMAGRDTTSAAMTWLFWLLSKHPRKEEMILNEVKSVFGGNGDDDKLKPFDYEGLTEMRFLKACLCESMRLYPPVAWDSKHAVDDELLPDGTAVRRGDRVTYFPYGMGRMEELWGKDCYEFKPDRWFDEPAEDNGVLKYVSPYKFPVFQAGPRVCLGKEMAFIQMKYVTASILSRFRIKPVSLDQPAFVPLLTAHMAGGFKVRVQKKTENDSPMDGGA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0156 522 Gene3D Cytochrome P450 25 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 PANTHER CYTOCHROME P450 29 506 - -
Glsi13g0156 522 SUPERFAMILY Cytochrome P450 42 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 FunFam Cytochrome P450 34 514 - -
Glsi13g0156 522 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 Pfam Cytochrome P450 41 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0156 522 CDD CYP86A 76 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0156 Glsi-ChrGlsi13 8504303 8505871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0156 11 513 Cytochrome P450 AT3G48520 59.369 0.0 609