Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0120 ATGAGTAGCAACAGCATAAACTCAGTTTTCTATGCTGAGTCCTACCATCCTATTCAAGCTGGAAGCATAGACGGCACTGATATTCTTCCTCACGATAATGCTGTTTATCGAGCTCATCTCTGTTCCTCAGCTGGCCTCTATGACCCATTTGGCGATCCTAAGGCCACAGGAGACCCGTATTGCACTGTCTTCGTTGGTCGCCTATCTCGCCTCACTACAGAAGAAACTCTCCGCAAGGTCATGAGCAAGTATGGTCGGGTGAAGAACTTACGCTTGGTCAGGGATATTGTAACTGGAGCTTCCTGTGGTTATGCTTTTGTTGAATACGAAACTGAAAAAGAAATGCGGCGTGCTTACAAGGATGCTCATCATTCTATTGTTGATAATTGTGAAATCATAGTTGATTATAACAGACAGCAGTTGATGCCTGGGTGGATTCCTAGAAGGTTAGGTGGTGGCCTTGGTGGTAAGAAGGAATCAGGACAGCTTCGTTTTGGGGGAAGAGAAAGACCATTTCGTGCTCCCCTGAGACCAATACCATACAAGGATTTGGAGAGGCTTGGCATTCCACCTCCACCTGAAGGAAGATACATGTCACGCTTTCAGGTCCCATCACCTCCTAGAAGAGAAAGGAAAGTTTTAGACAGGGAAGATGGCTCTCGCAGAAAAAGGGGTTCTAAGGACAGGATGGAAGGTATCCTCGAAAATCCTGGGGACAATAAAGAAGGGCATAACAAAAGGAGATCAATTCACCGAGAGGATCATTCTCATGGAAATAGCTCTATGGAAAGGAAAGAAGGGAGGGATGGCCATTACCATAGTAGGAGCTCAGCTGGGAAGGAACGCCATCACAGGAGCTCTGCTGAAAGGAGGGAACACTCTCATAAAAGGAAAGAGAGAGATGAACACTCATATGGGCGGCAAAAATATAGTAACCATTCCCATCGTGAGGGCTAA 957 0.4619 MSSNSINSVFYAESYHPIQAGSIDGTDILPHDNAVYRAHLCSSAGLYDPFGDPKATGDPYCTVFVGRLSRLTTEETLRKVMSKYGRVKNLRLVRDIVTGASCGYAFVEYETEKEMRRAYKDAHHSIVDNCEIIVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYKDLERLGIPPPPEGRYMSRFQVPSPPRRERKVLDREDGSRRKRGSKDRMEGILENPGDNKEGHNKRRSIHREDHSHGNSSMERKEGRDGHYHSRSSAGKERHHRSSAERREHSHKRKERDEHSYGRQKYSNHSHREG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0120 318 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 10 227 - -
Glsi13g0120 318 FunFam Small nuclear ribonucleoprotein U11/U12 subunit 35 48 169 - -
Glsi13g0120 318 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63 132 IPR000504 GO:0003723
Glsi13g0120 318 SMART rrm1_1 62 135 IPR000504 GO:0003723
Glsi13g0120 318 MobiDBLite consensus disorder prediction 205 318 - -
Glsi13g0120 318 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 61 139 IPR000504 GO:0003723
Glsi13g0120 318 Gene3D - 48 168 IPR012677 -
Glsi13g0120 318 SUPERFAMILY RNA-binding domain, RBD 48 167 IPR035979 GO:0003676
Glsi13g0120 318 MobiDBLite consensus disorder prediction 150 318 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0120 61 137 Eukaryotic Initiation Factors Gene Family AT1G49760 28.571 9.76e-06 45.4