Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0066 ATGGGAAAGCAGATTCGTGAGAAACAGCCTGCCACTGCAGCGGAGATTAGCAGTCATCCTGGAAGAGCTTGGGGAATTCTTAATATTATGAACTATCACCATTGGCGTCATGTCAAGAGAAGGCTCACACACAGGAAGCACGGTGGTGGAAGAAATGCTGCCAGAGCAGATATTACAGGGACTCTTGATGCCTCTGGGTTCAATAATATGCAGGAGCACTATGAGCCGGAGTCAAAATTATCTACTGTTGAAGAAACACCAGTACAGTCCACTCCACCAGGCAAACAATCTGTGAAAGCTCGATTAAAAGCACTTATTACTGAAGAACTCTCTAGAAAGAAGGGTCGACATAAAAGAAGTTCAACCTACCCTGTGAAGCCACAACCGAACCAAGCTGGTTCCATTCATGATTTGGAGCGTTCAGATCTTATTGAACCCACAGAAACCCATCATGCTGTTGATACACTGGAAGAAGTTGCCCCAGTTATCTCAACTAACAACAACGAAATGTGTGTAGAGTGTGGTACCATGTTTTCCAACGACTCTGTGGAATATAGCCAGGCTCATAAACATCAGAAGCAACCAACAGAACATCAGGTATTTCCGCAAGAAACATCGAGCTATCCTAGTCAATGTGCGCCAGAAGAAAAATCAATGCAGGCAAAGTTACTTACAACTGATGTTTCGCCCCATCTTTTCAAGGATTTTCTGGATGCTCTTGATATAATCTACAAAAACAAGGACTTGCTGTTAAAATTTCTACAGGATCCAAGTTCTCCTTTGGCATACCACTTTCATAATCAACAAGCATTAAGTGGAAAAATGAGACTGACGAAGTCCATATCATTTCCCGTGGCTGGTTCTTCATCAGGTGTTAAAGCGTCTGATCCTGGCCAAAACATAACCAAGATGGTAGGTGACAAATTCAATCCAAAAGGAAAGAGACAGTTACAAATTAAAAATCAAGCACAAAGTGCACCCCGGTCTGAATCTTCAGATGATATTCACCAACAGTCCGTGTCAGCAAGTTCTTCTAATAAAGTTGATAAAATCCTGAATCTAAATCAAGAACTTTCTGAAAGAGAGTATAAGTCTTCATCAGTTTCATCCCGGGTTCAAAATCATATTGTAATTAACCGTTTCAAGGATCTTAAACGGAAGGTAAAACATGTTATTGAAGAGAGCAAAAATGAAAAGCGCCGCATAACCATGGATGCTATACTTCACAAAGTTCCTCATGGAAATAAATTTTCCCAAGAATTGAAGAAGGAGATTCTTGACCAATCCAAAGTCCCTGTGATTAATGGCGAAGGAAAAGACATTGCTACTAGCGATTGTGACAGTGTTCTCTCCACTTATTACTTCAGCAAGCGTCAAATATGCCCCATGAGGACTTCATCTCTAAATGAATCGGTTGGGAGATATTCTCAGCTTTATGCGAATTGTTTTAACAAAGAAGCGAAGTACCCCAGATCCGAGAGGTTAAAGTTGAAAAAAGAGGAGAGAACTTCAATATTAAGGACCCCAAAATCCTTTCATAGGTTTCTTTCATTGCCTAATCTTAAAACTTACTTTTATCAGAGTGAGGAGCCTTCTGCTTTTTTACCTCCCCAGATGCCAATTAGGAAATTTGGAGAGAACACCACAAGAATAAGTACTACTGATGAACAGAAGAGTTTTGACCTTAGTGATTTAAAGAATCAGGTACCGATTCATACTAGTGCAGATAATATAACTCAGGAAATGGTTTCAACGAGGGGCCAAAAAGAAATTGTCATCAGAAGCGATGCTGAAAAGGAGGTAACCCAAAAGGAGAGCATAGGAATAGATGATACTGGAAAATTGACAGATAGGGATAGCAATGTGCAGGACAGTGGACAAAGTAGAGAATCTACTGCTATGGAGGTGGTTGATGCAAAATCAGTCTCCCTGTCTGACTCCAGCTTCCTAGATGATACAATTGACTTTGAGAAGTTATCTTTACCAGAAGATTCAGAAATAAAGCCAGGGTCAGCTGATGAATTGGGTCATATGGCACAGCAACAAGAGGCTAATATAGATTATCCTGAAGTGGTGAGGACTGGGGAGGATTTTCTGAAATTTGGTTCTCTAAGCAAGCGTTTGAACTTAGAAATTCCTAGCTTTGAAGTGGATGAAAACAGTGAAGTTGAATTTAATTATGTGAGAGATGTCTTAGAGCTATCTGGGTTCACGGACCATGGATCCCTTGGGATATGGTATTCTAATGACCAGCCAGTTGATCCCGTAGTGTACGAAGAATTGGAGGGCTGCTTGCTTTTTGATCCTGACTGTTCTGGTAATTGCAATGAAGGTGGCCATTGTAATCATCTGCTTTTGTTTGATTTGATCAATGAGATATTATTGGAGATTTTTGGGAGATCATACAGTTATTATTCCAATCCCTTGTCTTCTCTATGCCACATTCCTACAAGGCCAGCAGGGGACCATGTTCTTCGTGAAGTCTGGACACTCATTAGCTGGTATCTGAGCTCAAGATCTGAGGCTCACCCGTCATTGGATTACTATGTGAGCAGAGACCTAGCAAGAAATGATGGGTGGATGAATCTCCAATTTGAATCTGAATGCGTGGGGCTTGAGCTAGATGACTTGATCTTTGATGATCTTTTGGAGGAAATCATTTGCAATTGA 2670 0.4082 MGKQIREKQPATAAEISSHPGRAWGILNIMNYHHWRHVKRRLTHRKHGGGRNAARADITGTLDASGFNNMQEHYEPESKLSTVEETPVQSTPPGKQSVKARLKALITEELSRKKGRHKRSSTYPVKPQPNQAGSIHDLERSDLIEPTETHHAVDTLEEVAPVISTNNNEMCVECGTMFSNDSVEYSQAHKHQKQPTEHQVFPQETSSYPSQCAPEEKSMQAKLLTTDVSPHLFKDFLDALDIIYKNKDLLLKFLQDPSSPLAYHFHNQQALSGKMRLTKSISFPVAGSSSGVKASDPGQNITKMVGDKFNPKGKRQLQIKNQAQSAPRSESSDDIHQQSVSASSSNKVDKILNLNQELSEREYKSSSVSSRVQNHIVINRFKDLKRKVKHVIEESKNEKRRITMDAILHKVPHGNKFSQELKKEILDQSKVPVINGEGKDIATSDCDSVLSTYYFSKRQICPMRTSSLNESVGRYSQLYANCFNKEAKYPRSERLKLKKEERTSILRTPKSFHRFLSLPNLKTYFYQSEEPSAFLPPQMPIRKFGENTTRISTTDEQKSFDLSDLKNQVPIHTSADNITQEMVSTRGQKEIVIRSDAEKEVTQKESIGIDDTGKLTDRDSNVQDSGQSRESTAMEVVDAKSVSLSDSSFLDDTIDFEKLSLPEDSEIKPGSADELGHMAQQQEANIDYPEVVRTGEDFLKFGSLSKRLNLEIPSFEVDENSEVEFNYVRDVLELSGFTDHGSLGIWYSNDQPVDPVVYEELEGCLLFDPDCSGNCNEGGHCNHLLLFDLINEILLEIFGRSYSYYSNPLSSLCHIPTRPAGDHVLREVWTLISWYLSSRSEAHPSLDYYVSRDLARNDGWMNLQFESECVGLELDDLIFDDLLEEIICN 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0066 889 Pfam Domain of unknown function (DUF4378) 724 885 IPR025486 -
Glsi13g0066 889 MobiDBLite consensus disorder prediction 315 346 - -
Glsi13g0066 889 Coils Coil 381 401 - -
Glsi13g0066 889 MobiDBLite consensus disorder prediction 74 96 - -
Glsi13g0066 889 MobiDBLite consensus disorder prediction 287 346 - -
Glsi13g0066 889 Pfam Protein of unknown function (DUF3741) 216 259 IPR022212 -
Glsi13g0066 889 MobiDBLite consensus disorder prediction 619 634 - -
Glsi13g0066 889 MobiDBLite consensus disorder prediction 597 618 - -
Glsi13g0066 889 MobiDBLite consensus disorder prediction 597 634 - -
Glsi13g0066 889 MobiDBLite consensus disorder prediction 74 99 - -
Glsi13g0066 889 PANTHER PROTEIN TRM32 1 889 IPR044257 -
Glsi13g0066 889 MobiDBLite consensus disorder prediction 111 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0066 Glsi-ChrGlsi13 4240946 4244843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0066 703 879 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 56.044 1.73e-58 213