Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0055 ATGGCTTTGCCAGCTTGCTCACCGGAGCAACTGGCTCAGTTATTTGGTGCCAACACCACTAACGCCACAGCCGCAGCAAATTTCATCTGTGACAGATTTACAGCTGTCACCAACAAGTTCTCTGACACCGCTTTCGCCGTTGACAACACCTACCTCCTGTTCTCTGCTTACCTCGTTTTCTCCATGCAGCTCGGCTTTGCCATGCTCTGCGCTGGCTCCGTCCGTGCCAAGAACACCATGAACATCATGCTCACTAATGTGCTTGACGCAGCCGCCGGGGGACTCTTCTACTACCTATTTGGCTTCGCTTTCGCCTTCGGAGGCCCCTCAAATGGCTTCATCGGCCACCACTTCTTCGGCCTCGAGGACATTCCCTCCTCCACCTTTGACTACAGCTACTTTCTCTACCAATGGGCTTTTGCCATCGCAGCCGCCGGCATCACTAGCGGCTCCATCGCCAAGCGAACCCAGTTCGTTGCTTACCTCATCTACTCTTCCTTCTTAACAGGGTTCGTTTACCCTGTTGTGTCTCATTGGTTCTGGTCCGGTGACGGTTGGGCTAGCGCCACCAACTCGGACCAGCTATTCGGAACCGGAGTCATAGATTTCGCCGGGTCTGGTGTGGTTCACATGGTGGGTGGTATCGCTGGTTTGTGGGGCGCACTTATCGAGGGACCAAGAATTGGTCGATTCGACAGCTCGGGTCGACCCATTGCACTTCGTGGCCACAGCGCCTCCTTGGTCGTGCTTGGTACTTTCATGCTTTGGTTCGGATGGTACGGGTTCAATCCGGGTTCGTTTACGAAGATTTTGAGTGCTTACGATTCTGGAAACTACTACGGCCAATGGAGCGCCGTGGGCAGAACGGCCGTGACCACCACCCTAGCCGGTTGCACAGCCGCATTGACAACTCTTTTGGCAAGAGGATTCTCTCGGGTCATTGGAATGTGA 951 0.5447 MALPACSPEQLAQLFGANTTNATAAANFICDRFTAVTNKFSDTAFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGGPSNGFIGHHFFGLEDIPSSTFDYSYFLYQWAFAIAAAGITSGSIAKRTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASATNSDQLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDSSGRPIALRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYDSGNYYGQWSAVGRTAVTTTLAGCTAALTTLLARGFSRVIGM 316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0055 316 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Glsi13g0055 316 Gene3D Ammonium transporter AmtB like domains 26 314 IPR029020 -
Glsi13g0055 316 Pfam Ammonium Transporter Family 51 308 IPR024041 GO:0008519|GO:0016020|GO:0072488
Glsi13g0055 316 PANTHER AMMONIUM TRANSPORTER 20 308 - -
Glsi13g0055 316 SUPERFAMILY Ammonium transporter 47 307 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi13g0055 Glsi-ChrGlsi13 3835668 3836618 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0055 5 308 Inorganic Solute Cotransporters AT4G13510 82.353 8.17e-177 497