Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0038 ATGATAGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCAAGATTCACATGTCACAACTACAGTGAGGGGCACTGTAGGGCATATTGCACCAGAATATCTTTCCACAGGGCAGTCCTCTAAGAAGACTGATGTCTTTGGATTTGGCATTCTCCTTCTTGAGTTGATAACAGGCCAGAGGGCTCTAGAATTTGGAAAAGCAGCAAACCAAAAAGGAGCTATGCTTGATTGGGAGAAGAAACTTGAACTGCTTGTAGACAAGGATCTCAAGAACAATTATGACTGGATCGACCTTGAGGAAATGGTTCAAGTGGCTCTCTTGTGTACTCAATATCTTCCAGGCTACAGACCCAAAATGTCTAAAGTAGTGCGAATGCTTGAAGGTGACGGACTGGCAGAAAGATGGGAAGCTTCTCAAAGAGCTGACACAACTAAGTGCAAACCCCATGAGTTCTCTTCATCAGATGACTCTTCAATAAATTTGCTTAAACAACCAAGTGGAGCTGACTCAACTTAA 519 0.4297 MIVGDFGLAKLLDHQDSHVTTTVRGTVGHIAPEYLSTGQSSKKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWEKKLELLVDKDLKNNYDWIDLEEMVQVALLCTQYLPGYRPKMSKVVRMLEGDGLAERWEASQRADTTKCKPHEFSSSDDSSINLLKQPSGADST 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0038 172 Pfam Protein kinase domain 3 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0038 172 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 2 138 - -
Glsi13g0038 172 MobiDBLite consensus disorder prediction 140 172 - -
Glsi13g0038 172 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0038 172 MobiDBLite consensus disorder prediction 154 172 - -
Glsi13g0038 172 SUPERFAMILY Protein kinase-like (PK-like) 3 137 IPR011009 -
Glsi13g0038 172 Gene3D Transferase(Phosphotransferase) domain 1 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0038 Glsi-ChrGlsi13 2931961 2934387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0038 2 157 Receptor kinase-like Gene Family AT5G16000 78.443 2.94e-84 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi13g0038 Pkinase 5.1e-13 CL0016