Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0035 ATGTTGCTCACGTTGCTCTTATATCACTTGTTTCAGGACGAAATTTCAAGCCCAAGTAGTGCTCAAATTTTTGAATTTTGTGACCGTGAATTGTTCCCAGAGACTCTGCAGAATTCTGAGGTCAGCTCCAGCTCAAACTGTTGCTATGAAGAGAACTCCTCAAATGCCACAAACATATCTCAAGCTTTAGATGTGGACAATACGTTCAATAGCAATAGAAGTTCAGTCACCACCACAACTAGCACCACTGCAACCACTAACACGACGAACAATAACACAACCAACAGTAGTGATCTGTCCATTATCTTTGACTCCCAAGAAGGAACCGAGAATGACATCTCCGCCTCCATAGACTTCTCATCATCTCAAGCTTTTTCTGTCCCTCCATTTCTCCCAGTCTCAAGTCAACAGGGGCAATTCGATTTCTCTTTAGTGCAGCCTCAGGTCCCGCTAGCAGCAGATTTTGTTGTTAATGGACTCTCTTATTATCCCTCAGACCCCATTGCATCTCTCATGGTGGCTCCATTACCATCATTTTTTGAAGAGGATTGCTCATCTTCAGTCCCTTCTTATGTGCCTTTGAATCCTTCATCTCCTTCTTGCTCTTATCTCAGTCCCGGGATAGGTGCATACATGCCTCCTGGGCCTATTAATACTGCCTTATCTGCTGGCAGTTCCGGGATATTTGGTGGGAGCATTCTTCTGGGTTCTGAAATGCAGACACGAGAACTGGAATACCAGGGAGAAAATGGTGGAATATTTTGTCAAGGTTCAATTCAGAGGGTATTTAACCCTCCAGACCTACAGGCATTTGGCACTGAGAGTCAGCAACTGGTAGCTGGGCCTGGGAGTTCCACCACTTTGACCCCAGAAATCTCAAATTTGGAGGATTCCACCTTCAAGGTTGGAAAACTTTCCGTTGAGCAAAGGAAAGAAAAGATTGATAGATACATGAGGAAACGGAACGAGAGGAACTTCAATAAAAAAATCAAGTATGCCTGCCGAAAAACCCTGGCAGATAGCCGACCCCGAGTCAGAGGAAGGTTTGCAAAAAATGAAGAACTTGGAGAGAATCATAGACCTGTCAGTAGCAATCATGAAGAAGATGATGAAGAAGAAGTAGCAGTGAAAGAAGAAGATGATATGGTTGATTCCTCAGATATCTTTTCCTACATCAGTGGGCTACACTCCTTCAAATGCAATTATTCCATCCAATCCTGA 1221 0.4373 MLLTLLLYHLFQDEISSPSSAQIFEFCDRELFPETLQNSEVSSSSNCCYEENSSNATNISQALDVDNTFNSNRSSVTTTTSTTATTNTTNNNTTNSSDLSIIFDSQEGTENDISASIDFSSSQAFSVPPFLPVSSQQGQFDFSLVQPQVPLAADFVVNGLSYYPSDPIASLMVAPLPSFFEEDCSSSVPSYVPLNPSSPSCSYLSPGIGAYMPPGPINTALSAGSSGIFGGSILLGSEMQTRELEYQGENGGIFCQGSIQRVFNPPDLQAFGTESQQLVAGPGSSTTLTPEISNLEDSTFKVGKLSVEQRKEKIDRYMRKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNEELGENHRPVSSNHEEDDEEEVAVKEEDDMVDSSDIFSYISGLHSFKCNYSIQS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0035 406 MobiDBLite consensus disorder prediction 348 381 - -
Glsi13g0035 406 ProSiteProfiles CCT domain profile. 310 352 IPR010402 GO:0005515
Glsi13g0035 406 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 38 382 IPR045281 GO:0009909
Glsi13g0035 406 MobiDBLite consensus disorder prediction 74 98 - -
Glsi13g0035 406 MobiDBLite consensus disorder prediction 348 367 - -
Glsi13g0035 406 Pfam CCT motif 310 352 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0035 Glsi-ChrGlsi13 2844944 2847028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0035 290 359 C2C2-CO-like Transcription Factor Family AT5G24930 38.571 2.40e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi13g0035 CCT 1.1e-18 CL0281