Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0029 ATGGAAAGCGAAGCAATAGCCGAAGTTGAAGGTGCATCGTCAGAGGATGTGGAGGCAGCGGAGACAGGGTCCCAAAACAAACTGGAGAGAAAATGGATTTTCTGGTTCGATAATCAATCAAAACCTAAACAAGGTGCTGCCTGGGGAACCTCTCTTCGCAAGGTTTATACCTTTGACACTGTCGAGGAGTTCTGGTGTTTGTATGATCAGATTTTGAAGCCCAGCAAGTTGCCGGGAAATGCGGACTTCCACTTGTTCAAAGCTGGTATTGAACCAAAATGGGAAGATTCTGAGTGTGCTAGTGGAGGAAAGTGGACTGTCGCCAGCAGCAGAAAGGCTAACCTTGACACCATGTGGCTTGAATCTTTGATGGCTCTGATTGGAGAGCAATTTGATGAGGCGGAGGACATATGTGCAGCGAACGAAGCTGCCCAGATGAGCATTGGGAGGAAGTGGAAGGAGATCATTGATGTTAATGACAAAATATATTTGACAAAATATATTATAGCTTTCATGTAA 519 0.4509 MESEAIAEVEGASSEDVEAAETGSQNKLERKWIFWFDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQILKPSKLPGNADFHLFKAGIEPKWEDSECASGGKWTVASSRKANLDTMWLESLMALIGEQFDEAEDICAANEAAQMSIGRKWKEIIDVNDKIYLTKYIIAFM 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0029 172 MobiDBLite consensus disorder prediction 1 15 - -
Glsi13g0029 172 ProSitePatterns Eukaryotic initiation factor 4E signature. 82 105 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Glsi13g0029 172 MobiDBLite consensus disorder prediction 1 23 - -
Glsi13g0029 172 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 12 140 IPR001040 GO:0003723|GO:0003743|GO:0006413
Glsi13g0029 172 Pfam Eukaryotic initiation factor 4E 27 140 IPR001040 GO:0003723|GO:0003743|GO:0006413
Glsi13g0029 172 Gene3D RNA Cap, Translation Initiation Factor Eif4e 2 167 IPR023398 -
Glsi13g0029 172 SUPERFAMILY eIF4e-like 24 164 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0029 Glsi-ChrGlsi13 2649144 2663046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0029 1 167 Eukaryotic Initiation Factors Gene Family AT5G35620 54.450 3.46e-63 191