Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0018 ATGTTCTCTCCACTGAGATCACTTCTTGATGAGCAACTGAGATCGATCAATCACTTTTCTGGGTCATCTTCTTCTTCTTCTCTGCTTTTTCTTTCACCCGAATCTCTAACTCTGGCTAATCCGTGGTGGACGGGTCAGGTGGGGTTGCCGGGTGTAGATCAGCCGGCAGCGAATTTGCCTCTTGCCCTGAACAAACGCCACAGCACTGAACTTTCCATCAATGAATTAAGCAGCGGTAAGAGCAGTGGCGTCAATAGAGATGACGACGATGAAAGAGATAACGGAGACGAACCCAGAGAGGGTGCAGTTGAGGTTGGAACCCGCAGACCCAGAGGGCGACCTCCTGGGTCCAAAAACAAGCCAAAACCACCCATATTTGTGACCAGAGACAGCCCAAACGCTCTCAGGAGCCATGTGATGGAGGTAGCTGGTGGAGCTGATGTTGCCGAGAGCGTAGCCCATTTCGCCAGAAGGCGTCAGCGTGGGGTTTGTGTGCTCAGTGGAAGTGGCTCTGTGGCCAACGTTACTCTCAGACAACCTGCAGCTCCCGGAGCTGTGGTGGCACTTCATGGAAGGTTCGAAATTCTATCCCTAACCGGAGCCTTCCTGCCGGGTCCTGCTCCTCCCGGATCTACCGGTTTGACCGTGTACCTCTCTGGAGGACAGGGGCAGGTCGTCGGAGGAAGTGTTGTCGGATCTCTAGTTGCAGTTGGACCAGTGATGGTTATTGCTGCAACTTTTGCTAATGCCACCTATGAGAGATTACCACTTGATGATGATGATGAGGGTGCTGCCAGCGCCGCCCAGGGACCCGGCGGAGGGTCGCCACCCGGGATCGGAAGCAGTGGGGGTCAGTTGCAGGGTGGACAGATTCCAGATCCCTCATCTCTGCCTTTGTATAATCTGCCACCAAATCTGCTACCCAACGGTGGGGGAGCACAGGTGGGACATGAAGCTTTTGCTTGGGCTCATGGAAGGCCACCTTACTAG 990 0.5434 MFSPLRSLLDEQLRSINHFSGSSSSSSLLFLSPESLTLANPWWTGQVGLPGVDQPAANLPLALNKRHSTELSINELSSGKSSGVNRDDDDERDNGDEPREGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAHFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLSGGQGQVVGGSVVGSLVAVGPVMVIAATFANATYERLPLDDDDEGAASAAQGPGGGSPPGIGSSGGQLQGGQIPDPSSLPLYNLPPNLLPNGGGAQVGHEAFAWAHGRPPY 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0018 329 Gene3D - 135 264 - -
Glsi13g0018 329 FunFam AT-hook motif nuclear-localized protein 135 262 - -
Glsi13g0018 329 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 248 IPR005175 -
Glsi13g0018 329 MobiDBLite consensus disorder prediction 280 294 - -
Glsi13g0018 329 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 79 325 IPR014476 GO:0003680
Glsi13g0018 329 ProSiteProfiles PPC domain profile profile. 132 270 IPR005175 -
Glsi13g0018 329 MobiDBLite consensus disorder prediction 258 308 - -
Glsi13g0018 329 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 260 - -
Glsi13g0018 329 MobiDBLite consensus disorder prediction 73 132 - -
Glsi13g0018 329 CDD DUF296 136 218 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0018 Glsi-ChrGlsi13 2066360 2067773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0018 38 329 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.925 6.60e-110 319