Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0003 ATGCCTGTGAGAGAGTTGGGGAGCTCCACTCCTTCGCAGGTTTCAGGTGCAGATTCAGGCCAGAGTTCATTCCAAGCTTGTACACTTTCAAGCGTTGGGCAGCCATTCTATGTTCTTCAGAAAGCTTCATCCCGAAGAAAAGATAGAACATCAGCTGGACAGGGAAAATTAAGAAAGAGAAAGGAGCTATCTTCATCACTTCAAAGCACTAGGAAACTAGAAGGAAGTATGGCAGCAGAAAGTGGTGGCCAACGGTTTAAGCAACTGCAAGTTGAAGCATTTCACTTTGTTTGGTCAAAAATTGAGTCCACCATCAAGGATGTTTTGAGAGATATCAACGCTAGTGTTTATAATGAAATACAACGATGGGTTCTGGAGTGCTTCAATGCTACTAGATCACTTGGAGAACCTAGCTTTGCTGAAGCAACTCGATCTTTTCCTTTTCTGAATAAAAGTACTCGTGGACAGCTATTCACTGGGTTGGTTATCACCGGAAACATGGAGTTTGTTGATGATATTTTGACATTTGAAGAGCTTGGCTGTTTCTTGAAATCCCATGGATGCCATGTGGTTATGCTATCATCACTTGACATTTCGGTAAAAAATGGGATTGCTGGTTGCCTCAAGGCTTTGTTGCGAGAGTTTCTGGTGACAGCTAATGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGGAAACTACAATAAACCGCTGGTTCTTATCATTAATGATTTGGAAAGATGCTGTGGGTCAGTCTTATCTGATTTGATCCTCTTGTTGAGTGAATGGGTTATCAGCGTGCCGATCATCTTAATATTTGGAGTTGCGACCACAGTGGATGCCCCTGGGAACATTCTTCCATCGCATGTTCTTCAGCATTTGTGCCCCTGTAAATTTATGCTTGGATCACCAGCTGAGAGAATGGATTCAATTGTTGAGGCTGTGCTGGTGAAGCATTGTGCTATATTTAGTATTGGTCATAAAGTGGCACTTTTCCTGAGAGACTACTTCTTAAACAAGGATGGGACACTAACATCTTTTATAAGAGCTTTGAAGATAGCATGCATGTTGCATTTCTCTATGGAGCCTATGAGTCTCATACTTAGGCAAGCACTCGCTGAAGACCAAAAGTATGAACAATCTGCACTATCACCTGACACTATGCTGAAGTACATGGACGAACTTCCATCTTATGTGAGGAATCGAATGGTTGATCAAACTGGAAAGAATGTGGCTCAGGGCTTGTCCGAATTGGTCACAGTGAAGAAGATGTGGAGCACGGCGGTCCTGTGCCTCTATGAAGCTGGAAAATATAGCAGAATTCGACTGCTGGACTTGTTTTGTGAAGCACTCAATCCAGATTTGTACCCATCAAGGGCTTCTGATTGTCATGTGGGGGATGAAAATGATCATGGTTTGTCCGCATCAAATGATCCTTGCCAGCAATATTGTATCCCTCGAAGGGGTGGTTTTATTTGTCAGATAGTAAGCAAAGTGAGGTACTTAGAATGTTTTCCTCCTTTTAAGAAAACCTTCTTGGTGCAGACTTATATTTCTGTTATGGCAAATTGA 1584 0.4205 MPVRELGSSTPSQVSGADSGQSSFQACTLSSVGQPFYVLQKASSRRKDRTSAGQGKLRKRKELSSSLQSTRKLEGSMAAESGGQRFKQLQVEAFHFVWSKIESTIKDVLRDINASVYNEIQRWVLECFNATRSLGEPSFAEATRSFPFLNKSTRGQLFTGLVITGNMEFVDDILTFEELGCFLKSHGCHVVMLSSLDISVKNGIAGCLKALLREFLVTANDSADISILASWYREQGNYNKPLVLIINDLERCCGSVLSDLILLLSEWVISVPIILIFGVATTVDAPGNILPSHVLQHLCPCKFMLGSPAERMDSIVEAVLVKHCAIFSIGHKVALFLRDYFLNKDGTLTSFIRALKIACMLHFSMEPMSLILRQALAEDQKYEQSALSPDTMLKYMDELPSYVRNRMVDQTGKNVAQGLSELVTVKKMWSTAVLCLYEAGKYSRIRLLDLFCEALNPDLYPSRASDCHVGDENDHGLSASNDPCQQYCIPRRGGFICQIVSKVRYLECFPPFKKTFLVQTYISVMAN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0003 527 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 31 470 IPR020795 GO:0003677|GO:0005664|GO:0006260
Glsi13g0003 527 MobiDBLite consensus disorder prediction 40 74 - -
Glsi13g0003 527 CDD Orc3 92 371 - -
Glsi13g0003 527 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 237 370 IPR045667 -
Glsi13g0003 527 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 83 216 IPR045667 -
Glsi13g0003 527 MobiDBLite consensus disorder prediction 1 22 - -
Glsi13g0003 527 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0003 Glsi-ChrGlsi13 128316 139332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0003 11 458 Core DNA Replication Machinery Family AT5G16690 48.115 2.05e-141 422