Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi12g2893 | ATGATTGTTCATTTTCTTATGCGCACAGAATCAATTTCTGTCACTGAGGCAATAAATAAATTTTCTTGGGCACATGACCCTGGAATTTACAAGCAGGATTATATTGATGCTCTTTACATGTATTATCATGAAAAGAAGCCTGAAGAAGTTGTTTGTCCTCAAACTCCAGAATGGAAGAGACTTTCTGATCCTGATTTTCATGGTGCTGTTGTCCCAACCGTAGAAAATTGTGGAGATGTTCCTCTACATGTATGTGATTTATTCCTTATTGAGGGACATGCTTTTGTTTAG | 291 | 0.3677 | MIVHFLMRTESISVTEAINKFSWAHDPGIYKQDYIDALYMYYHEKKPEEVVCPQTPEWKRLSDPDFHGAVVPTVENCGDVPLHVCDLFLIEGHAFV | 96 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi12g2893 | 96 | Gene3D | Protein tyrosine phosphatase superfamily | 1 | 68 | IPR029021 | - | |
| Glsi12g2893 | 96 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 1 | 59 | IPR029021 | - | |
| Glsi12g2893 | 96 | PANTHER | MRNA-CAPPING ENZYME | 1 | 63 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi12g2893 | Glsi-ChrGlsi12 | 42048316 | 42048696 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi12g2893 | 1 | 93 | Protein tyrosine phosphatase (PTP) family | AT3G09100 | 51.613 | 1.13e-25 | 97.4 |