Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2892 ATGGGTCGAGGGATAATGTTGATGTTTTTGGCATGTCTCTTGGTTGAGACAATGTCAGTTGTTCGGGGGGAAGACCCTTACAAGTACTATACATGGAATGTTACCTACGGCACTATCTCACCTTTAGGAGTTCCACAACAAGTCATTCTCATCAATGACCAATTTCCTGGACCTGAAATTAATTGTTCTTCGAACAACAACATTGTTGTGAATGTTTACAATAATCTCGATGAGCCATTGCTTTTCACCTGGAGCGGCATCCAACAAAGGAAGAACTCTTGGCAAGATGGTACATTGGGAACCCAATGCCCCATCCTTCCTGGGACAAACTACACGTATCGATTCCAAGTGAAGGACCAGATTGGAACATTTTTCTACTATCCCACCACATCCTTTCATAGGGCAGCCGGTGGTTTCGGTCCTATTCGGGTCTTTAGTCGTCTATTGATTCCCGTTCCTTATCCCGATCCCGAGGATGAGTTCAATGTTCTCATTGGGGACTGGTACACCAAGAGCCACACCGCACTCAAGAATTTCTTGGACAGCGGTCGGTCCATCGGTAGGCCAAGTGGTGTGCTCATCAACGGAAAATCAGCCAAGGGTGATGGAAAGGATGAGCCACTCTTCACCATGAAGCCTGACAAGACCTACAAGTATAGAATCTGCAACGTTGGGATGAAGGATTCGCTCAACATCAGGATCCAAGGCCATCCCATGAAGCTTGTGGAGATGGAGGGATCCCACACCGTTCAGAACACCTACGATTCGCTTGATATCCACGTCGGGCAATGCTTTACTGTCCTTGTCACTTCTGACAAAGAGCCTAAGGACTACTACATGGTGGCTTCCACCCGGTTTACCAAGACTGTTCTTACCGGTAAAGCCATCATCCGCTACACAAACGGTAAAGGCCCTGCCTCACCAGAGATCCCAGAGGCGCCTGTCGGCTGGGCCTGGTCTCTTAACCAGTTCCGCTCTTTCCGTTGGAACCTTACCGCTAGTGCTGCTAGGCCTAATCCTCAAGGTTCTTATCATTATGGTCAAATCAACATCACTCGCACAATCAAGTTGGTTAACTCGGTCAGTAGCGCACAAGGCAAGCTCCGTTACGCCCTTAATGGTGTCTCGCATGTCGACTCTGAAACTCCTTTGAAGCTCGCTGAGTACTACGGAGTTGCTGACAAGGTTTTCAAGTACAATGCTATCTCTGATGAACCATCAGCCACTTTGGATAGTGTCACCGTGGCACCCAATGTCATAAACGGCACATTCCGTGACTTCATTGAGATAATCTTTGAGAACCATGGAAAGAGTGTTCAGTCATATCATTTGGACGGTTATGCGTTCTTTGCTGTCGCCATAGAGCCAGGTAGATGGACCCCTGAGAAAAGGAAGAACTATAATCTCCTTGATGCTTTGAGTAGGCACACCGTTCAGGTTTTTCCTAAATCTTGGGCCGCCATCATGTTGACGATCGACAATGCTGGAATGTGGAGCTTGAGGTCGCTATTAGCTGAGAACTGCTATTTGGGTCAACAACTTTATATTAGCGTTTTGTCACCTAACCGATCTCTCAGGGATGAGTACAACATTCCTGACACCCAACTTCTTTGTGGCATCGTCAAGGATTTGCCGAAGCCACCGCCATTCTCTTCTTAA 1659 0.4738 MGRGIMLMFLACLLVETMSVVRGEDPYKYYTWNVTYGTISPLGVPQQVILINDQFPGPEINCSSNNNIVVNVYNNLDEPLLFTWSGIQQRKNSWQDGTLGTQCPILPGTNYTYRFQVKDQIGTFFYYPTTSFHRAAGGFGPIRVFSRLLIPVPYPDPEDEFNVLIGDWYTKSHTALKNFLDSGRSIGRPSGVLINGKSAKGDGKDEPLFTMKPDKTYKYRICNVGMKDSLNIRIQGHPMKLVEMEGSHTVQNTYDSLDIHVGQCFTVLVTSDKEPKDYYMVASTRFTKTVLTGKAIIRYTNGKGPASPEIPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLVNSVSSAQGKLRYALNGVSHVDSETPLKLAEYYGVADKVFKYNAISDEPSATLDSVTVAPNVINGTFRDFIEIIFENHGKSVQSYHLDGYAFFAVAIEPGRWTPEKRKNYNLLDALSRHTVQVFPKSWAAIMLTIDNAGMWSLRSLLAENCYLGQQLYISVLSPNRSLRDEYNIPDTQLLCGIVKDLPKPPPFSS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2892 552 CDD CuRO_2_AAO_like_1 159 299 IPR034271 -
Glsi12g2892 552 Gene3D - 347 543 IPR008972 -
Glsi12g2892 552 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Glsi12g2892 552 Gene3D - 15 145 IPR008972 -
Glsi12g2892 552 Pfam Multicopper oxidase 161 301 IPR001117 -
Glsi12g2892 552 Pfam Multicopper oxidase 412 520 IPR011706 GO:0005507|GO:0016491
Glsi12g2892 552 SUPERFAMILY Cupredoxins 24 173 IPR008972 -
Glsi12g2892 552 SUPERFAMILY Cupredoxins 155 338 IPR008972 -
Glsi12g2892 552 Gene3D - 157 337 IPR008972 -
Glsi12g2892 552 SUPERFAMILY Cupredoxins 348 538 IPR008972 -
Glsi12g2892 552 PANTHER MULTI-COPPER OXIDASE 46 514 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2892 Glsi-ChrGlsi12 42043345 42045103 Dispersed/Tandem