Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2886 ATGAAGCTGGGATTTGTCCTCATTTCACTTGCGTTTTGCGGGTTTATAGTTAGATCAGTTTCTTCTTTGTCAAAACCGAAAGACCCGTACCTCGGAGTTGCTCCTGAAGATGACAAGTATTACAGATCGTCCGATGCAATAAAATGTAAAGATGGATCCAAGAAGTTCACCAAAGCTGAGCTCAATGACGACTTCTGTGACTGCGCTGATGGCACCGATGAGCCTGGTACTTCAGCGTGTCCAAGTGGAAGATTTTTTTGTCGGAATGCAGGACATGTCCCTCTTTTTCTTTATTCATCTAGAGTGAATGATGGTATATGTGATTGCTGTGATGGAAGTGACGAATATGACAGCAAAGTAAAGTGCCCAAATACTTGCTGGGAAGCTGGAAAAGTTGCTCGAGGTAAACTGAAAAATAAGATTGTCACATATCGAGAAGGTGTCACACTGCGAAAGCAAGAAGTTGAACAAGCAAAACTAGCTCTGGCAAAAGATGAGGCAGAACTTTCTAAATTGAAAAAAGAAGAAAGTACACTTAAAGGGATTGTGCAACAGCTAAAAGAGCATAAAGAACAGATAGAGAAGGCAGAGGAGAAGGAACGCATGTGGAAAGAAAAAGAGGAGAAGCAGAAAAAAGAGGCTGAGAAGAAAGCTCATGAAGAGAAACTGAAACTGGATGAAGAAGATAAGGGGTATATAAATGAAGCTGTGAAGCAATCTGATGACAAAGACAAAGATGTGGCAAGCAAACACGATCAAATTGGACTTCTAAATGATTCTCCTACAGATCAGGATATAGTAGAAGATAAGAACCTGGATGATGTACTTGATAATAACAATGGAGCCACTAATAGTCCTGGAAGTGGAGGATCTTCGCTTAATGTAGTGGAACAGAATGCAAGGAAAGATGAGGGAGAACCCGCTGTGAAATCTGAAACTGATCTTAAGGCTGGAAGGAAGGAGTCTTCTGATGAAGTAATCAATGCTGGAAATGATGTGCCTGAAAATACTGAGGGATTGTCAAGGGAAGAGTTGGGCCGGCTTGTTGCTTCTCGTTGGACAGGAGAAAATCCTGGTAAGGAAAGTGCTGAAGCTGATTCAACAATAGATAAGGGTGATGAAGATGATGAAGATCCTCCAAATGAGACAAATCATGAGGAATATGAAGGCTATGTGTCTGAAACTGATGAGGACAGCCGCAAATATGACAATGAAGATATAGAAGATGAAATTGATGAAGACTTTCAAGAGGAGGAGCATGATGACCTTAGTTCCTCCTACAAATCTGACACTGATACTGCACCTGACTTGTCAGATGATGTCACAACAAATAATCCTTCTTGGTTAGAGAAAATACAAAAAACTGTACGGAACATTTTTCAGGCTGTTAATTTATTCCAGACTCCAGTGAACCAGTCAGATGCTGCTCGTGTACGCAAGGAGTATGATGAGTCAAGTACCAAATTGTCTAAATTACAGTCAAGAATATCAAGTTTGAAGCAAAAGCTAAAACAGGATTTTGGTCCAGAGAAGGAGTTCTATTCATTCTATGATCGTTGTTTTGAAAGCAGGCAGAACAAGTACACTTACAAAGTCTGTCCCTATAAACAAGCTTCTCAGGAGGAGGGGTATAGCACCACACGTTTGGGGCAATGGGACAAATTTGAGGATTCATACAAAGTAATGGTTTTTTCTGGTGGTGATAAGTGCTGGAATGGGCCTGATAGGAGTTTGAAGGTCAGACTAAAATGCGGGTTGAAAAATGAGATAACTGATGTAGACGAACCAAGCCGATGCGAGTATGTAGCTTTATTATCTACCCCAGCCCTTTGCCAAGAGGAAAAGCTTAAGGAGCTACAACACAAGCTAGACTTGATGAATAAGGAACAACCAAAAAGCCATGATGAGTTGTGA 1914 0.4091 MKLGFVLISLAFCGFIVRSVSSLSKPKDPYLGVAPEDDKYYRSSDAIKCKDGSKKFTKAELNDDFCDCADGTDEPGTSACPSGRFFCRNAGHVPLFLYSSRVNDGICDCCDGSDEYDSKVKCPNTCWEAGKVARGKLKNKIVTYREGVTLRKQEVEQAKLALAKDEAELSKLKKEESTLKGIVQQLKEHKEQIEKAEEKERMWKEKEEKQKKEAEKKAHEEKLKLDEEDKGYINEAVKQSDDKDKDVASKHDQIGLLNDSPTDQDIVEDKNLDDVLDNNNGATNSPGSGGSSLNVVEQNARKDEGEPAVKSETDLKAGRKESSDEVINAGNDVPENTEGLSREELGRLVASRWTGENPGKESAEADSTIDKGDEDDEDPPNETNHEEYEGYVSETDEDSRKYDNEDIEDEIDEDFQEEEHDDLSSSYKSDTDTAPDLSDDVTTNNPSWLEKIQKTVRNIFQAVNLFQTPVNQSDAARVRKEYDESSTKLSKLQSRISSLKQKLKQDFGPEKEFYSFYDRCFESRQNKYTYKVCPYKQASQEEGYSTTRLGQWDKFEDSYKVMVFSGGDKCWNGPDRSLKVRLKCGLKNEITDVDEPSRCEYVALLSTPALCQEEKLKELQHKLDLMNKEQPKSHDEL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2886 637 MobiDBLite consensus disorder prediction 193 445 - -
Glsi12g2886 637 Pfam Glucosidase II beta subunit-like protein 479 635 IPR036607 -
Glsi12g2886 637 Gene3D - 513 611 IPR009011 -
Glsi12g2886 637 MobiDBLite consensus disorder prediction 428 445 - -
Glsi12g2886 637 ProSiteProfiles MRH domain profile. 518 613 IPR044865 -
Glsi12g2886 637 MobiDBLite consensus disorder prediction 384 400 - -
Glsi12g2886 637 Coils Coil 609 629 - -
Glsi12g2886 637 Coils Coil 155 229 - -
Glsi12g2886 637 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 8 637 IPR039794 -
Glsi12g2886 637 MobiDBLite consensus disorder prediction 193 252 - -
Glsi12g2886 637 MobiDBLite consensus disorder prediction 401 420 - -
Glsi12g2886 637 MobiDBLite consensus disorder prediction 299 326 - -
Glsi12g2886 637 SUPERFAMILY Mannose 6-phosphate receptor domain 524 611 IPR009011 -
Glsi12g2886 637 Coils Coil 475 502 - -
Glsi12g2886 637 Pfam Glucosidase II beta subunit-like 24 178 IPR028146 -
Glsi12g2886 637 MobiDBLite consensus disorder prediction 276 298 - -
Glsi12g2886 637 MobiDBLite consensus disorder prediction 368 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2886 Glsi-ChrGlsi12 41956366 41990342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2886 21 637 Calmodulin-binding Proteins AT5G56360 58.125 0.0 645