Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2876 ATGCAGGTGGTCAAGCTCCTAATCTTCCCACCACTTACGATCCTACTCCTTGTCCTTTCCTTTCATTTCATCACTAAATTTGTCAAAACAAGAAAGCACCCCAATCTCTATCCTCCTGGAAGCCTAGGATGGCCTCTTATTGGCGAAACCTTACAGTTTCTGCGATCCAACCCGGAAAGCTTCGTACGAGAGAGAATGGAGAAATATGACTCTAGGGTGTTCAAGACTTCAATGCTTGGAGAGCATGTGATTGTGTTTTGTGGGGTAGCTGGGAACAAGTTCTTATTTAGCAATGAGAACAAGAATGTTCAAGTATGGTGGCCCACCTCCGTAAGGAAGCTCTTGCGCTCCTCCTTGGTTAATATGGTTGGTGATGAAGCTAGGACCAAGAAAAGGTTGCTCACGAGTTTCCTTAATCCAGAAACACTCAAAAATTACTTGGCAAAAATGGATACTATTGCACAGCGCCATATTACCACACATTGGGAAGGGAAAGAGCAGGTACTCGTCTATCCCACTGCGAAGCTATACACGTTTGAATTGGCTTGTTGCTTGTTTGCAAGCGTTGAAGACTCTATCCATATCTCAAAACTTTCATCACAATTTGATAAATTTCTCAAAGGGGTGATTAGCTTCGCCATCAACTTGCCCGGAACAAGGTTTTGTAGTGCAATGAGAGCTACAAATGCAATAAGGGAAGAACTGAAAATAATCATAAAGAAAAGGAGACTAGATTTGGAATTCAAGGGGGTGTCACCTACCCAAGACCTTGTCTCACATTTGCTTGTTACATCTGACAGCAGCGGAAGGTTTTTGACCGAAATGGAGATTATTGATAACATACTACTATTGCTATTTGCTGGCCATGATACTTCAAGATCAGTCATATCATCGGCCATGAAATATCTTGGGCGGTTTCCTCAAGTTTACGAACAGGTGTTGGAAGAACAACTGGAAATCAGCAAGGGGAAAGAGGCAGGGGAGTTGTTGCAATGGGAGGATGTACAGAAAATGAAATACTCGTGGAATGTTGCATCGGAAATCCTAAGACTATCACCCCCCGTGACTGGTTCTTACAGAGAAGCATTGAAGAATTTCACCTATGCCAATTATACCATCCCTAAAGGGTGGAAATTGTTATGGAACACTGGATCATCACACAGGGATCCGACATTGTTCTTGAATCCTGAAGACTTTAATGCTTCAAGGTTCGAAGGGGCAGGGCCTACACCCTTTTCATTTGTTCCATTTGGAGGAGGACCTCGAATGTGTTTGGGGCAAGAGTTTGCCAGGCTGGAGATTCTGGTGTTTATGCATAATATTGTGAAAAGGTTCAAGTGGGAGTTAGTGAATCCCGACGAGAAGTTCCAGTATGATCCCATGCTAGAACCTTCAAAAGGACTTGCAGTACGTCTTCAGCCTCTCCACTTCTAG 1434 0.4344 MQVVKLLIFPPLTILLLVLSFHFITKFVKTRKHPNLYPPGSLGWPLIGETLQFLRSNPESFVRERMEKYDSRVFKTSMLGEHVIVFCGVAGNKFLFSNENKNVQVWWPTSVRKLLRSSLVNMVGDEARTKKRLLTSFLNPETLKNYLAKMDTIAQRHITTHWEGKEQVLVYPTAKLYTFELACCLFASVEDSIHISKLSSQFDKFLKGVISFAINLPGTRFCSAMRATNAIREELKIIIKKRRLDLEFKGVSPTQDLVSHLLVTSDSSGRFLTEMEIIDNILLLLFAGHDTSRSVISSAMKYLGRFPQVYEQVLEEQLEISKGKEAGELLQWEDVQKMKYSWNVASEILRLSPPVTGSYREALKNFTYANYTIPKGWKLLWNTGSSHRDPTLFLNPEDFNASRFEGAGPTPFSFVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWELVNPDEKFQYDPMLEPSKGLAVRLQPLHF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2876 477 Gene3D Cytochrome P450 28 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 CDD CYP90-like 65 474 - -
Glsi12g2876 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Glsi12g2876 477 FunFam Taxadiene 5-alpha hydroxylase 28 475 - -
Glsi12g2876 477 SUPERFAMILY Cytochrome P450 32 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 PANTHER CYTOCHROME P450 26 34 460 - -
Glsi12g2876 477 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2876 477 Pfam Cytochrome P450 38 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2876 Glsi-ChrGlsi12 41851490 41853806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2876 33 379 Cytochrome P450 AT5G36110 42.655 1.93e-97 297