Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi12g2861 | ATGGCTTCTCCCAGTGGGGTTTCTTCTGGTTCCAGCAGCTTTCTTCAGAACTCTGGCTCGGAGGGAGATGTGCAGCAGCATATTAGTGTTATGGAACAGAGGAAGAGGAAAAGAATGGTGTCCAATAGGGAATCGGCTCGTCGATCCAGGATGAAGAAACAGCAACACCTGGATGATCTGATCGGCCAGATGGGTCAGCTCAAGAAGGAGAACAACCAAATCATCACGAGCATGGACATAACCACCCAGCTGTACCTACAAATTGAGGCAGAGAATGCAGTTCTCAGGGTGCAGAAGGCAGAGTTGAGCAACAGATTGCAGTCTCTCAACGAAATCATACAATACATAAACTCAAGGAATTTCTTCTTTGATGAAATTGAAGACTCACGGGTTAATGATTTTGGCTTCATCGACAACCCATGGAACTCTCTGAATGTGAATCAATCAATCATGGCGTCTGCTGACATCATGTTGTGTTGA | 480 | 0.4562 | MASPSGVSSGSSSFLQNSGSEGDVQQHISVMEQRKRKRMVSNRESARRSRMKKQQHLDDLIGQMGQLKKENNQIITSMDITTQLYLQIEAENAVLRVQKAELSNRLQSLNEIIQYINSRNFFFDEIEDSRVNDFGFIDNPWNSLNVNQSIMASADIMLC | 159 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi12g2861 | 159 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 32 | 95 | IPR004827 | GO:0003700|GO:0006355 | |
| Glsi12g2861 | 159 | Gene3D | - | 32 | 88 | - | - | |
| Glsi12g2861 | 159 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Glsi12g2861 | 159 | SUPERFAMILY | Leucine zipper domain | 34 | 87 | IPR046347 | GO:0003700|GO:0006355 | |
| Glsi12g2861 | 159 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 37 | 52 | IPR004827 | GO:0003700|GO:0006355 | |
| Glsi12g2861 | 159 | FunFam | BZIP transcription factor | 32 | 83 | - | - | |
| Glsi12g2861 | 159 | MobiDBLite | consensus disorder prediction | 28 | 55 | - | - | |
| Glsi12g2861 | 159 | Pfam | bZIP transcription factor | 33 | 80 | IPR004827 | GO:0003700|GO:0006355 | |
| Glsi12g2861 | 159 | SMART | brlzneu | 30 | 94 | IPR004827 | GO:0003700|GO:0006355 | |
| Glsi12g2861 | 159 | CDD | bZIP_plant_GBF1 | 35 | 85 | IPR045314 | GO:0003700|GO:0006355 | |
| Glsi12g2861 | 159 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
| Glsi12g2861 | 159 | Coils | Coil | 85 | 112 | - | - | |
| Glsi12g2861 | 159 | PANTHER | BZIP TRANSCRIPTION FACTOR 44 | 8 | 156 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi12g2861 | Glsi-ChrGlsi12 | 41693687 | 41694166 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi12g2861 | 29 | 158 | bZIP Transcription Factor Family | AT4G34590 | 52.083 | 1.43e-39 | 129 |
Transcription factors information