Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2849 ATGGCATGCACAACTCTTCCAGCAACACCCATCTCACAGATTGATTTCCCATGCTTCTCATTTCAGCGGAACGAGAGGATTGTAGCATCACCAATCTTTTTCAGCTCCAACACCCAATGTCCCAAATTTAAAATTCAACGTCGATTTATGAGATTTCAACGCTTTAAATCAAATGGGTTTGTCGGATTTTCTAGTTCTAGTGATCAAATTGAGAAGAAGACTGTTTCCACTCCTGAAACAACATTAAATAACAAATTTGCAGAGCTCGAGGTTCAAACCCGCACGTGGAACTGGAGGGGTTACTCTGTTCGCTATCAATATTCTGGAAACAATGGCCCTGCGCTAGTTTTAGTGCACGGTTTTGGAGCAAACAGTGACCACTGGAGGAAAAATATTCCAGTTCTTGCAAAATCTCACCGGGTTTACTCTATTGATCTTATTGGTTATGGATATTCTGATAAACCAAATCCTCGACAAATTAATGATGACTCCTTTTACACTTTTGAGACGTGGGCTACCCAATTAAATGAGTTTTGTGTTGATGTTGTTAAGGATGAAGCATTCTTTGTTTGCAATTCTATTGGAGGAGTTGTTGGCCTTCAGGCAGCAGTAATGAAGCCACAAAGCTGCAAGGCCATAATCCTTCTTAATATATCTCTGCGTATGCTTCATATCAAGAAGCAGCCTTGGTATGGAAGGCCATTCATTAGATCGTTCCAGAGATTGCTTAGGGATACTGCAGTAGGCAAATTTTTTTTCAATGCTGTTGCAACTAAAGAATCTGTGAGGAACATTCTTTGCCAGTGTTACCATGACACCTCCAAGGTGACGGATGAACTAGTGCAGATCATCCTTAATCCAGGACTGGAACCTGGAGCAGCAGAGGTCTTTCTTGAGTTTATTTGTTATTCTGGTGGCCCTCTCCCTGAAGAACTACTACCCCAAGTGAAGTGCCCAGTTTTGATAGCATGGGGTGACAAGGATCCATGGGAACCGATTGAAATTGGAAGGAACTATGAGAATTTTGATTCCGTAGAAGACTTCGTTGTCTTTCCAAATGTTGGCCACTGCCCCCAGGATGAAGCACCTCATCTTGTGAACCCACTTGTCGAGTCATTTGTGGCACGCCATGCTAAATCCTCATCTGCTACCTCAACAGTTGAAATCCTTGCTTTTGTTATAATCACGTCAACTTTGGCCAAAGATAAAGCAAACCAGTACGAAAATGATGAACGTTTGAAAAAGGAGGAGACGAAGCTCAACACATTGGCAGAAGTCACTCCACCCAAATTGGTTTTCTCAAGTCCACAGCCGCAAGTGACAACTAGAAGGCTAGGGGCTACACCTGAGAGAACTTGCCAACAGTCCGAAAGTGTTGGGGTTCTAAATGTTGATGGCTACTACGACTGCCTGCTCGGATTGTTTGACAAAGGTGTGGAAGAGGGATTTATCAATCCCTCCGCCAGGAACATCGTCATATCTGCAAGTTCTGCAGAGGAGCTTCTTCGCAAGATGGAGGAATACACACCCATGCATGAGCAAGTGGCAACACGTGAGAGCTGGAGCACAAATAAAACTGCAGATTCATAG 1590 0.434 MACTTLPATPISQIDFPCFSFQRNERIVASPIFFSSNTQCPKFKIQRRFMRFQRFKSNGFVGFSSSSDQIEKKTVSTPETTLNNKFAELEVQTRTWNWRGYSVRYQYSGNNGPALVLVHGFGANSDHWRKNIPVLAKSHRVYSIDLIGYGYSDKPNPRQINDDSFYTFETWATQLNEFCVDVVKDEAFFVCNSIGGVVGLQAAVMKPQSCKAIILLNISLRMLHIKKQPWYGRPFIRSFQRLLRDTAVGKFFFNAVATKESVRNILCQCYHDTSKVTDELVQIILNPGLEPGAAEVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEIGRNYENFDSVEDFVVFPNVGHCPQDEAPHLVNPLVESFVARHAKSSSATSTVEILAFVIITSTLAKDKANQYENDERLKKEETKLNTLAEVTPPKLVFSSPQPQVTTRRLGATPERTCQQSESVGVLNVDGYYDCLLGLFDKGVEEGFINPSARNIVISASSAEELLRKMEEYTPMHEQVATRESWSTNKTADS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2849 529 PRINTS Alpha/beta hydrolase fold signature 138 153 IPR000073 -
Glsi12g2849 529 PRINTS Alpha/beta hydrolase fold signature 189 202 IPR000073 -
Glsi12g2849 529 PRINTS Alpha/beta hydrolase fold signature 320 334 IPR000073 -
Glsi12g2849 529 SUPERFAMILY MCP/YpsA-like 457 506 - -
Glsi12g2849 529 Pfam Possible lysine decarboxylase 458 505 IPR031100 -
Glsi12g2849 529 SUPERFAMILY alpha/beta-Hydrolases 90 374 IPR029058 -
Glsi12g2849 529 PANTHER HYDROLASE 67 379 - -
Glsi12g2849 529 Gene3D - 440 524 - -
Glsi12g2849 529 FunFam Os07g0575800 protein 183 377 - -
Glsi12g2849 529 Pfam alpha/beta hydrolase fold 113 362 IPR000073 -
Glsi12g2849 529 Gene3D alpha/beta hydrolase 63 381 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2849 Glsi-ChrGlsi12 41588075 41599825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2849 100 376 Miscellaneous Gene Families AT1G80280 24.490 6.24e-15 75.9