Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2838 ATGGACTTCCAAGTGGTTGTTCTAGCCGGCGGTACCTCCAAGAAACTCCTCCCTCTCGTATCCAAGGAGGTTCCAAAAGCTTTACTTCCCGTGGCGAACAGGCCAGTTCTATCTTACGTTCTCGAGTTGTTGGAGCTGAGTAACCTTAAAGATCTCATAGTGGTAGTTGAAGGCGAAGACGCGGCTCTTCATGTTGGGAGTTGGATTTCAGGGGCTTATGTTGATCGTCTGCAAGTTGAGGTAGCTGCAGTTCCTGAGGATGTGGGAACAGCTGGTGCAATTCGGGCCATCGCACACCACCTAACTGCTAGAGACATTTTGGTTGTCAGTGGTGATCTTGTTTCTGATGTACCACCTGGTGCCATTGCTGCTGCTCATAGAAGACATGATGCAGCGGTCACTGCAATGCTTTGCCCTGCTCCTGTAAGTGGACTTTCAGATTCAGGATCCTCTGGTGGGAAAGACAAAACCAAGAAAGTTGGTCGCTATGACTTAATAGGGCTGGATCCCACAAAACAGTTTTTACTTCACATAGCAACTGGAGCTGAATTAGAAAAAGATCTTCGCATTCAGAAGAGCATAGTCCGTGCAGTTGGTCAGATGGAAATAAGAGCTGATCTCATGGATGCCCACTTCTATGCATTCAAGAGATCAGTTCTTCAAGAAGTTTTAGATCAAAAGGTCACATTTCATAGCTTAAAGCAGGATGTATTGCCATATCTTGTCAGGAGCCAACTGAAATCAGAATTATTATTAAATGGTACGCCTCAAGCTGAAGAAAATGGATATGAGAAGGTTATATCTCAGAGCAATCAACAAATGTTATCTCAAATCCTTTCTAATGCGTCTCAACCAACCTTTCATCAACGATATGCTCTGGGTCCTGATGGTTCTTCTCCTGGTCGAAGGACCCATAAATGCTGTGTTTATATTGCTGGAAGCAGCAAGTATTGTGCACGCTTAAACTCTATTCAAGCATACAGTGACATAAATCGAGATGTAATAGGAGAGGCTAGTCATTTATCAGGATATTCCTTCTCTGCTCAAAACAACATTATCCATCCTTCTGCAGAGCTCGGAACAAAAACAACTGTAGGACCACAATGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGCTCTGTTATTGGTCGCCACTGCAGGATAGGTGCCAATGTTAAGGTTGTTAATTCCATAGTTATGAATCATGTTACTATTGGAGATGGTTGTTCGATCCAAGGTTCTGTCGTCTGCAGCAATGTACAGCTTCAAGAGCGTGTTGTGCTAAAAGATTGTCAAGTTGGGGCAGGTTTTGTAGTCACTGCTGGCAGTGAGTACAAAGGGGAAGTATTGGCTAGGAAAGAAAAATGA 1386 0.4408 MDFQVVVLAGGTSKKLLPLVSKEVPKALLPVANRPVLSYVLELLELSNLKDLIVVVEGEDAALHVGSWISGAYVDRLQVEVAAVPEDVGTAGAIRAIAHHLTARDILVVSGDLVSDVPPGAIAAAHRRHDAAVTAMLCPAPVSGLSDSGSSGGKDKTKKVGRYDLIGLDPTKQFLLHIATGAELEKDLRIQKSIVRAVGQMEIRADLMDAHFYAFKRSVLQEVLDQKVTFHSLKQDVLPYLVRSQLKSELLLNGTPQAEENGYEKVISQSNQQMLSQILSNASQPTFHQRYALGPDGSSPGRRTHKCCVYIAGSSKYCARLNSIQAYSDINRDVIGEASHLSGYSFSAQNNIIHPSAELGTKTTVGPQCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSIVMNHVTIGDGCSIQGSVVCSNVQLQERVVLKDCQVGAGFVVTAGSEYKGEVLARKEK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2838 461 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 349 IPR029044 -
Glsi12g2838 461 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Glsi12g2838 461 CDD LbH_eIF2B_gamma_C 370 450 - -
Glsi12g2838 461 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 460 - -
Glsi12g2838 461 Pfam Nucleotidyl transferase 6 143 IPR005835 GO:0009058
Glsi12g2838 461 Coils Coil 459 461 - -
Glsi12g2838 461 Gene3D Hexapeptide repeat proteins 350 454 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2838 3 450 Eukaryotic Initiation Factors Gene Family AT4G18300 23.013 1.99e-18 86.3