Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2831 ATGGGAGAAACACAGAGAGAGTCAATATTGTCGGAGAGGGAGAAGGAAGAAGAAGCAGAAGCCGAAGAGAATATCTGGAGATACATATTTGGGTTTGTGGAAATGGCAGTTGTTAAATGTGCCATTGAGCTTGGCATAGCGGACGCTATTGAAAGCCATGGAAGCCCCATCACACTCTCACAACTATCATCAACTCTAAACTGTGATCCTTCCCTTCTCAACCGCATCATGAGGTTCCTAATGTACCGCAAGATCTTCAAACAAGTACCCACAACCCATGGTCGCCTAGGCTATGCTCAAACGCCTCTGTCTCGCCGTTTGATGAAGAATGGAGAAAAGAGCATGGCTGCTTTTGTTCTGCTGGAGAGCAGCCCAGTGATGCTAGCTCCTTGGCATAGTCTAAGTGCTCGTGTTTTGGCTAATGGCACTTCGTCTTTTGAAAAAGCTCATGGTGAAGATGTGTGGAGTTATGCAGCTGCAAATCTTGCTCACAGCAACCTCATCAATGAAGCCATGGCTTGCGATGCCAAGATAGCTGTGCCTGCAATAATTGAAGGTTGTGGAGAGGCGTTTGAGGGTGTAAGCTCTGTAGTGGATGTTGGTGGGGGAAATGGAACTGCCATGCGCGTATTGGTTAATGCCTGCCCTTGGATTCGATGCATCAATTTCGATGTTCCCCATGTTGTCTCTACAGCACCTAAGTGCGATGGCGTGGAACAAATCTCAGGTGACATGTTTCTTAAAGTTCCAAGAGCTGATGCTGCCTTTCTCATGTGGGTATTGCACGATTGGGGAGATGAAGAATGTATCCAAATCTTGAAGAACTGTAAGGAAGCTGTACCAAGAGAAAATGGAAGGGTTATAATTGCCGAAGCAGTGATTGAAGAAGGAGGAAAGGAAAATAAGTTAAAGGATGTGGGATTGATGATAGACATGGTGATGATGTCTCATACTAAAATGGGCAAAGAAAGGACACCGGAAGAATGGGAATACGTCATCAAGGAGGCTGGATTCAGCAGATATACTGTCAAAAACATCCATGCGGTGCAGTCGGTGATAACTGCTTTCCCATGA 1074 0.4572 MGETQRESILSEREKEEEAEAEENIWRYIFGFVEMAVVKCAIELGIADAIESHGSPITLSQLSSTLNCDPSLLNRIMRFLMYRKIFKQVPTTHGRLGYAQTPLSRRLMKNGEKSMAAFVLLESSPVMLAPWHSLSARVLANGTSSFEKAHGEDVWSYAAANLAHSNLINEAMACDAKIAVPAIIEGCGEAFEGVSSVVDVGGGNGTAMRVLVNACPWIRCINFDVPHVVSTAPKCDGVEQISGDMFLKVPRADAAFLMWVLHDWGDEECIQILKNCKEAVPRENGRVIIAEAVIEEGGKENKLKDVGLMIDMVMMSHTKMGKERTPEEWEYVIKEAGFSRYTVKNIHAVQSVITAFP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2831 357 PIRSF O-mtase 3 357 IPR016461 GO:0008168
Glsi12g2831 357 SUPERFAMILY "Winged helix" DNA-binding domain 15 111 IPR036390 -
Glsi12g2831 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 357 IPR016461 GO:0008168
Glsi12g2831 357 FunFam O-methyltransferase family protein 109 356 - -
Glsi12g2831 357 PANTHER O-METHYLTRANSFERASE 36 340 IPR016461 GO:0008168
Glsi12g2831 357 Gene3D - 7 107 IPR036388 -
Glsi12g2831 357 Pfam O-methyltransferase domain 131 339 IPR001077 GO:0008171
Glsi12g2831 357 Gene3D Vaccinia Virus protein VP39 108 357 IPR029063 -
Glsi12g2831 357 Pfam Dimerisation domain 37 80 IPR012967 GO:0046983
Glsi12g2831 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Glsi12g2831 357 FunFam O-methyltransferase family protein 10 107 - -
Glsi12g2831 357 CDD AdoMet_MTases 197 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2831 Glsi-ChrGlsi12 41463419 41464611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2831 38 338 Monolignol Biosynthesis Gene Families AT5G54160 33.871 5.22e-62 201