Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2830 ATGTCGGGGTGGGAGAAGGAAGAAGAAGCAGAAGCTGAAGAAGATCTAGAGACACATATTAGGGTTTATGGAAATGGCAGTTGTGAAATCCTAGGCTATGCTCAAACACCTCTGTCTCATCGTTTGATGAAGAATAGAGAAAAGAACATGGCTGCTTTTGTTCGGCTAGAGAGTAGCCCAGTGATGCTAGCTCTTTGGCATAGTATAGGTGCTCGAGTTTTAGCTAATGGCACTTCACCGCTTGCAAAGGCTGTGGAGCACTATGCAGCTGCAGATCTTGATCTCAGCAAACTCATCAATGAAGCCGCGGCTTGTGATGCGAAGCAGGTAATGCTTGCAATAGTTGAAGGTTGTGGAGAGGAATTTGATGGGGTCAGCTCTGTGGTGGATGTTGGTTGGGGACATGGAGCTGCCATGAACGTATTGGTTAAGGCTTGCCCTTGGATTCGATGCATCAACTTCGATGTTCCCCATGTTGTCTCTTTAGCTCCTAATTAG 498 0.4659 MSGWEKEEEAEAEEDLETHIRVYGNGSCEILGYAQTPLSHRLMKNREKNMAAFVRLESSPVMLALWHSIGARVLANGTSPLAKAVEHYAAADLDLSKLINEAAACDAKQVMLAIVEGCGEEFDGVSSVVDVGWGHGAAMNVLVKACPWIRCINFDVPHVVSLAPN 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2830 165 Pfam O-methyltransferase domain 109 164 IPR001077 GO:0008171
Glsi12g2830 165 PANTHER O-METHYLTRANSFERASE 31 160 IPR016461 GO:0008168
Glsi12g2830 165 Gene3D Vaccinia Virus protein VP39 43 165 IPR029063 -
Glsi12g2830 165 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 165 IPR016461 GO:0008168
Glsi12g2830 165 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 48 164 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2830 Glsi-ChrGlsi12 41456033 41456673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2830 21 165 Monolignol Biosynthesis Gene Families AT5G54160 30.000 5.10e-14 66.6