Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2822 ATGAGTTTATCCCTGCAAGGGAAAACTGTGTTAACGGCTTGCTGGGGGTATACGCCTTTTATTAAAAAAAAAAACAGTAAGATGGGGATCAAGGCTAAGAAAGCTATGAAGAAGAATTTGAAAAAGGCCACCGCTAAACTATCTGTTTCGAGCAACAAAACAGAGGGTGCTGACTTTTTGCCCTTGGAAGGTGGTCCTGCACGCAAACTTCCTGAACAAAATTTGTCACAGAACAACGCCACAGTTTTATATATTGGTCGGATACCACATGGATTCTATGAGAAGGAGATGGAAGGTTATTTTGGACAATTTGGCACTATCAAGAGATTGAGAATCGCAAGAAATAAAAGGACTGGAAAATCAAAACATTATGGGTTCATAGAATTTGAATCTCCCGAGGTGGCAAAAATTGTAGCTGATACTATGCACAATTATCTGCTATATGAACACCTTCTGCAGGTTTATCTGATACCTCCTGAGCATGTTCATCCAAAATTATGGAGAGGTTACAACTACCGTTTCAAGCCATTGGACTATGTTCAAAATGAGAGAGAGCGGCATGACAAGGAAAGAACATTGGAAGATCACAATAAATTGGTTGAAAAGATCCTGAAGCGTGATAAAAAACGGAAAAAGAGGATAGAGGCTGCTGGGATAGATTATGAATGCCCTGAGATTGTCGGTAGCGTCCAACCTGTTCCAAAGAAAATAAAGTTTGAGGACTAA 726 0.3981 MSLSLQGKTVLTACWGYTPFIKKKNSKMGIKAKKAMKKNLKKATAKLSVSSNKTEGADFLPLEGGPARKLPEQNLSQNNATVLYIGRIPHGFYEKEMEGYFGQFGTIKRLRIARNKRTGKSKHYGFIEFESPEVAKIVADTMHNYLLYEHLLQVYLIPPEHVHPKLWRGYNYRFKPLDYVQNERERHDKERTLEDHNKLVEKILKRDKKRKKRIEAAGIDYECPEIVGSVQPVPKKIKFED 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2822 241 SUPERFAMILY RNA-binding domain, RBD 68 171 IPR035979 GO:0003676
Glsi12g2822 241 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 81 159 IPR000504 GO:0003723
Glsi12g2822 241 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 29 240 - -
Glsi12g2822 241 Gene3D - 31 156 IPR012677 -
Glsi12g2822 241 CDD RRM_NIFK_like 82 154 - -
Glsi12g2822 241 SMART rrm1_1 82 155 IPR000504 GO:0003723
Glsi12g2822 241 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 83 150 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2822 81 154 Eukaryotic Initiation Factors Gene Family AT1G71770 29.730 5.53e-07 48.1