Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2814 ATGAGCAGTCAAGGACCAAGTGAAGGCCAAGGAGCAAATGTGAGCTGTTTTCCGAGTAGGCAAGTGGCTTTAGACCTGGACCTCAACCATTCTCTTCATGAGGAGAGCTTGGATGCAGCTTCTCAAGGATTGGCTCATGATAATGAAAATTTGCAGTTGCAGACTCCAGGTGATGATGATGTTGTTATGATCTCTCCAAGGAAATTTGAAGAAGCCAAGAAGAATTCTCAAAGAAAATATGCTTGTCGAAGCTATGGGGTTATGCAAGTGCTTGATGAAGTACGAGGAAACATTTCAGAATTGACAGCAGATACAGGTGCCTACCCTGTTAATGACAACAGACATGAAACTGCACAAAACCAAGGATATGTGGACTGTGAACTGCGTCTAGGTGTGAAAGACAGTAAGAAAGCCGAGAAAACTGATGTTCTTGCACCTCCAATGCTGTCTCCAAGTGAGGTCCTGCCTGAGGCACCCACCTTCAGTTGCACAATTTGCATGGGCCAGCTGATTGAAGAGACATCAACTAAGTGTGGTCACATTTTCTGCAAGACATGCATTCAGGCAGCAATAGCTGCTCAACACAAATGCCCCACCTGCAGGCGTAAACTTAGAAAGTCTGACATTTTTAGGGTCTATCTTCCAACTGCTAACTAG 657 0.4475 MSSQGPSEGQGANVSCFPSRQVALDLDLNHSLHEESLDAASQGLAHDNENLQLQTPGDDDVVMISPRKFEEAKKNSQRKYACRSYGVMQVLDEVRGNISELTADTGAYPVNDNRHETAQNQGYVDCELRLGVKDSKKAEKTDVLAPPMLSPSEVLPEAPTFSCTICMGQLIEETSTKCGHIFCKTCIQAAIAAQHKCPTCRRKLRKSDIFRVYLPTAN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2814 218 PANTHER ELFLESS, ISOFORM B 19 217 - -
Glsi12g2814 218 SMART ring_2 163 200 IPR001841 -
Glsi12g2814 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 216 IPR013083 -
Glsi12g2814 218 Pfam Zinc finger, C3HC4 type (RING finger) 163 200 - -
Glsi12g2814 218 ProSitePatterns Zinc finger RING-type signature. 178 187 IPR017907 -
Glsi12g2814 218 ProSiteProfiles Zinc finger RING-type profile. 163 201 IPR001841 -
Glsi12g2814 218 SUPERFAMILY RING/U-box 162 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2814 Glsi-ChrGlsi12 41339687 41343409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2814 137 216 C3H Transcription Factor Family AT3G07200 50.000 1.08e-22 89.0