Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2806 ATGGCTTCTCTTCAAAACTCCAGCATTGAAATCCATAATATTCCATCAGACCTCTTTATAGCTCAGATCATGCAAATCCATGCAAGCGTATCAAAGCTTGAATCCCTTAGGCCTTCTAAGCAAGTCAACACCCTCTTAACCCAGCTTGTCAAACTCTGCATCCTCCCTTCTTCCATAGACATCAAGGCCTTACCCCAAGAGATTCTAACCATGCGTGAGAGTCTCATCAATCTCTGTGGCCGAGCTGAAACCCTCTTAGAGTTTGAATTCTCAACTTTACTCACCAATATACCCAAACCCTTGAACAATCTCAATCTCTTCCCTTACTATGAAAACTATGTTAAACTAGCCAACATGGAGAACACAATCCTAACTGAGAATGGGATAGTGCAACCCAAGAAAGTAGCATTTGCAGGGTCTGGTCCGATGCCACTTAGTTCCATTATAATGGCCATGCATCACATGGAATCCACACACTTTGATAACTTTGATATTGATGAGAAGGCAAATGAGGTAGCTAGAAAGATTGTTGCTTCAGATGGAGAGCTTGAGAAGAGGATGAAGTTTGAGACGAAGGACATAATGGAGGTGAGAGAGAAGTTGGGGCAGTATGATTGCATATTTTTGGCAGCTCTTGTGGGAATGAACAGAGAAGAGAAAGTGAAGATAATTGGGCACATAAGGAAGTATATGAAGGAAGGAGGTGTTTTACTAGTGAGAAGTGCGAAAGGGGCAAGAGCTTTCTTGTACCCAGTTGTAGAGGAGAATGATGAGTTGGGGAACTTTGAGGTGCTTACTGTTTTTCATCCCACCAATGATGTGATTAACTCGGTTGTTCTTTTGCGTAAGCCTGCAGTTTAG 861 0.4239 MASLQNSSIEIHNIPSDLFIAQIMQIHASVSKLESLRPSKQVNTLLTQLVKLCILPSSIDIKALPQEILTMRESLINLCGRAETLLEFEFSTLLTNIPKPLNNLNLFPYYENYVKLANMENTILTENGIVQPKKVAFAGSGPMPLSSIIMAMHHMESTHFDNFDIDEKANEVARKIVASDGELEKRMKFETKDIMEVREKLGQYDCIFLAALVGMNREEKVKIIGHIRKYMKEGGVLLVRSAKGARAFLYPVVEENDELGNFEVLTVFHPTNDVINSVVLLRKPAV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2806 286 Gene3D Vaccinia Virus protein VP39 16 285 IPR029063 -
Glsi12g2806 286 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 286 IPR004298 GO:0030410|GO:0030418
Glsi12g2806 286 Pfam Nicotianamine synthase protein 16 284 IPR004298 GO:0030410|GO:0030418
Glsi12g2806 286 CDD AdoMet_MTases 163 239 - -
Glsi12g2806 286 PANTHER NICOTIANAMINE SYNTHASE 3 15 284 IPR004298 GO:0030410|GO:0030418
Glsi12g2806 286 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 241 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2806 Glsi-ChrGlsi12 41230527 41231387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2806 16 283 Nicotianamine Synthase Gene Family AT5G04950 48.897 3.08e-92 274