LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi12g2757	ATGGTTGGTGGTGTGGAAGAGCAGAAGCTTCACATGAAGAGGGTAATGGATAGTAATCCAAGAAACTGGAGATGGGCAAGAAAAAGCCACTTGCATGTAATGTTTGCTCTTCTTTTACTCCAAAAGCATTTTGTCATCTCTGAGATATTTGCTGAGGCAACAGGCAGTGTTCATATTGTTTATATGGGAGATAAGATATATGATGATCCAGAAACTACAAAAAAGCATCATCACAAAATGCTATCTTCATTACTAGGAAGCCAAGAAGCTGCAAAAAATTCCATTCTTTACAGCTATAAGCATGGGTTTTCAGGGTTTGCTGCAAGAATGACAAAATCTCAGGCAGAAGAAATTGCAAAGTTTCCTGGTGTTGTCAATGTCATTCCAAACCGCATTCACAAACTCCATACAACCAGAAGCTGGGACTTCATTGGGATCAACCATCCCCCCTCAAAAACTGCTTTCTCAGAAAGCAACTTAGGTCAAGGAACCATTATAGGAGTCATAGACACAGGAATTTGGCCAGAGTCTGAAAGTTTTAATGACGAAGCAATGGGTCCAATCCCATCACGATGGAAAGGCATTTGCCAAGAGGGAGAGCACTTCAATTCCACCAACTGCAACAAGAAGATAATCGGTGCTCGATGGTTCATAAAAGGAATAACTAGTGAGACTAAGAAGCTCATCCATGCAAATGACAGTAACGAATTTCTGTCAGCACGTGATGGTGTTGGTCATGGCACTCATACTGCTTCCACAGCAGCTGGGTATTTTGTGGGAAAAGCAAATTATAGAGGACTTGCTGCTGGTTTAGCCAGAGGTGGAGCACCCTTGGCTCACTTAGCTATCTACAAAGCTTGCTGGGACTTAAATTTTGGCGGCTGCACAGACGCTGATGTCCTAAAAGCTTTCGACAAGGCTATACATGATGGTGTAGATGTCTTATCTGTTTCTCTTGGCACTGAAATTCCTCTTTTCTCATACGTTGATCATCGGGATACAATATCAATTGGTTCCTTTCATGCAACTTCCAAGGGAATCACAGTTGTCTGTTCTGCTGGAAATGATGGCCCCATATCTCAGACCATTACAAATACTGCGCCTTGGCTTATTACAGTTGCAGCCACCACAATAGATAGGGCCTTTCCAACAGCCATTGTTCTTGGAAATAACCACACAGTTTGGGGACAGTCCATTGACACTGGGAAACTTGACATTGGATACGTTGCTCTTACATACTCAGAACGCATAGCGCTAGACCCAGCAGAGAATTTAGCCAAGGATTGTCAAGCAGGAAGTCTGAATGCGACAAAAGCAGCAGGTAAAATTGTTCTATGCCTTTCAAAATCAGATCAGCAGGATATTTTTTCTGCATCAGTTACAGTACGAGAAGCTGGTGGAGTTGGGCTAATATATGCACAATTTCATGAAGATGGACTCAGCCAGTGTGGTTTAATTCCATGTATTAAGGTAGATTATGAAGTGGGGACACAAATCCTATCCTACATCAGAAGAGCAAGGTTTCCAACTGCAAAACTGAATTTTCCAAAGACTGTTATTGGGAAATCTACCTCTCCCCAAGTTGCTTCTTTCTCATCTAGAGGACCTGGTACCATGTCTCCAATCGTGCTAAAGCCGGACATAGCCGCACCAGGTGTGAACATTTTGGCTGCATTTCCACCTAAGAGTACAGCACAGAACAGTGGGTTTGCACTTCTATTTGGAACTTCAATGTCTTGTCCCCATGTAGCAGGAATAGTAGCTCTCATCAAATCAAAACACCCAAAATGGTCACCTGCAGCCATAAGATCAGCTCTTGTAACAACAGCTTCTCAGACTGGAACAGATGGAGACGTTATATCTGAAGAGGGTTCTACTCATAAGGCAGCCGACCCATTTGACATTGGGGGAGGGCAAGTAAATCCCAACAAAGCAATGGAACCAGGGCTCCTATATAACATTAGCTCAGAGGAATATATTCAATTCCTCTGTTCCATAAGCTACAGTAGTGCATCCATTAGCAGAGTGACCAAGACCACCACAAGCTGTAAGAAAGAAAAAAATCCAGGACTAAACCTTAATCTTCCTTCCATAACAGTTCCAAACTTGAAGAAGACTGTAAAAGTAACAAGAACGGTGACAAATGTGGGAAACGTAACTGCTATATATAAAGCTCTAGTGAAGGCTCCATATGGCGTAAAAGTGAGGGTTGAACCTCAAACTCTGAGCTTTAATTCAACCACCCATGTTCTGTCCTTCAATGTCATTTTTCTGTCAACCCAAAAGCTGCATGGAGATTACAAATTTGGCAGCCTAACATGGACAGACGGCAAGCATTTTGTGAGGAGCCCAATAGCCGTGCGTACCATAAAATTTGAATCCTATGCAGATGTGTAG	2397	0.4259	MVGGVEEQKLHMKRVMDSNPRNWRWARKSHLHVMFALLLLQKHFVISEIFAEATGSVHIVYMGDKIYDDPETTKKHHHKMLSSLLGSQEAAKNSILYSYKHGFSGFAARMTKSQAEEIAKFPGVVNVIPNRIHKLHTTRSWDFIGINHPPSKTAFSESNLGQGTIIGVIDTGIWPESESFNDEAMGPIPSRWKGICQEGEHFNSTNCNKKIIGARWFIKGITSETKKLIHANDSNEFLSARDGVGHGTHTASTAAGYFVGKANYRGLAAGLARGGAPLAHLAIYKACWDLNFGGCTDADVLKAFDKAIHDGVDVLSVSLGTEIPLFSYVDHRDTISIGSFHATSKGITVVCSAGNDGPISQTITNTAPWLITVAATTIDRAFPTAIVLGNNHTVWGQSIDTGKLDIGYVALTYSERIALDPAENLAKDCQAGSLNATKAAGKIVLCLSKSDQQDIFSASVTVREAGGVGLIYAQFHEDGLSQCGLIPCIKVDYEVGTQILSYIRRARFPTAKLNFPKTVIGKSTSPQVASFSSRGPGTMSPIVLKPDIAAPGVNILAAFPPKSTAQNSGFALLFGTSMSCPHVAGIVALIKSKHPKWSPAAIRSALVTTASQTGTDGDVISEEGSTHKAADPFDIGGGQVNPNKAMEPGLLYNISSEEYIQFLCSISYSSASISRVTKTTTSCKKEKNPGLNLNLPSITVPNLKKTVKVTRTVTNVGNVTAIYKALVKAPYGVKVRVEPQTLSFNSTTHVLSFNVIFLSTQKLHGDYKFGSLTWTDGKHFVRSPIAVRTIKFESYADV	798

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi12g2757	798	PRINTS	Subtilisin serine protease family (S8) signature	161	180	IPR015500	-
	Glsi12g2757	798	PRINTS	Subtilisin serine protease family (S8) signature	242	255	IPR015500	-
	Glsi12g2757	798	PRINTS	Subtilisin serine protease family (S8) signature	574	590	IPR015500	-
	Glsi12g2757	798	FunFam	Subtilisin-like protease SBT1.5	163	389	-	-
	Glsi12g2757	798	Pfam	Subtilase family	161	613	IPR000209	GO:0006508\|GO:0008236
	Glsi12g2757	798	Pfam	Peptidase inhibitor I9	57	136	IPR010259	-
	Glsi12g2757	798	Gene3D	-	379	520	-	-
	Glsi12g2757	798	Pfam	Fibronectin type-III domain	692	787	IPR041469	-
	Glsi12g2757	798	SUPERFAMILY	Subtilisin-like	135	650	IPR036852	GO:0004252\|GO:0006508
	Glsi12g2757	798	FunFam	Subtilisin-like protease SBT5.3	46	136	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi12g2757	Glsi-ChrGlsi12	40868210	40874637	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi12g2757	51	797	Subtilisin-like Serine Gene Family	AT1G32960	51.793	0.0	778

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