Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2726 ATGGCTGTATGTGGGTGTCTATCTGCGGTGAACATGAATTGGCAGAGTAATATGATTGGCAGTGGCACAAGACCTACCGCTGGATTTGGTTTTCCGAATACATCAGGTCAAACAATTTCATTAGCATTTGGTGGAAGCGAGTCCATGGGTCTTAGTTTGAGAATTCCTTATACACATTCTGTTAGAAGCAGGTTGAGGAAGAACGGCTTTCCCTTGCAGGTAGTTTGCATTGACTATCCAAGGCCAGAACTTGAAAATACAGTCAATTTCTTAGAAGCTGCTTACTTGTCTTCCACCTTCCGCACTTCATCACGCTCAACTACACCATTGGAGGTCATTATTGCGGGTGCAGGGCTAGCTGGTTTGTCAACTGCAAAATATTTGGCAGATGCTGGTCATAAACCTATACTACTGGAGGCTAGAGATGTTCTAGGTGGAAAGGTTGCTGCATGGAAAGATGAAGATGGAGATTGGTATGAGACAGGCCTACACATTTTTTTTGGGGCTTACCCCAACATTCAGAACTTATTTGGAGAACTTGGTATTAATGATCGGTTACAATGGAAGGAGCATTCTATGATTTTTGCAATGCCAAATAAGCCTGGAGAGTTCAGTCGATTTGATTTTCCCGAAGTCCTGCCTGCTCCGTTAAATGGAATATGGGCAATATTGAGGAACAATGAGATGCTGACTTGGCCAGAGAAAGTGAAGTTTGCTATTGGACTGCTGCCAGCTATGATTGGTGGACAAGCTTATGTTCAGGCTCAAGATGGTCTATCTGTTAAAGAGTGGATGAGAAAGCAGGGCATACCTGATCGAGTATCGGATGAGGTGTTCATAGCAATGTCAAAAGCACTAAACTTCATAAACCCTGATGAACTTTCAATGCAGTGTATCTTGATTGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCAAAGATAGCTTTTTTGGATGGCAATCCTCCAGAAAGACTCTGTATGCCAATTGTTGATCACATTCGATCCTTGGGTGGTGAAGTTCATCTCAATTCTCGCATTCAAAGAATTGAGCTAAATGATGACGGGACAGTAAAGAACTTGTTACTAAATGATGGGAAGGCGATTGAAGGGGATGCTTATGTGTTTGCAACTCCAGTTGATATCCTGAAGCTTCTTCTGCCTAACAACTGGAAAGAAATTCCATATTTCAAGAGATTGGAGAAACTGGTTGGAGTTCCAGTCATAAATGTTCATATATGGTTTGATAGAAAACTGAAGAACACATATGATCACCTACTCTTTAGCAGAAGTCCCCTTCTGAGTGTATATGCCGACATGTCAGTAACTTGTAAGGAATATTATAGCCCAAACCAGTCTATGCTGGAGTTGGTTTTTGCACCAGCGGAAGAGTGGATTTCACGAAGTGATGAAGATATTATTGATGCCACAATGAATGAACTTGCCAAACTTTTTCCAGATGAAATTTCTGCAGACCAAAGCAAAGCAAAGATTGTGAAGTACCATGTTGTTAAAACACCAAGGTCTGTTTACAAAACTGTTCCAAATTGTGAGCCTTGCCGTCCCATACAAAGATCTCCCATAGAGGGTTTCTATTTAGCTGGTGATTACACAAAACAAAAATATTTAGCTTCAATGGAAGGCGCTGTTCTTTCTGGAAAGCTTTGTGCGCAAGCTATTGTACAGGATTCTGAGTTGCTTGTTGCTCGAGGGCAGAAAAGGATGGCTCAAGCAAGTGTTCTTTAA 1746 0.4152 MAVCGCLSAVNMNWQSNMIGSGTRPTAGFGFPNTSGQTISLAFGGSESMGLSLRIPYTHSVRSRLRKNGFPLQVVCIDYPRPELENTVNFLEAAYLSSTFRTSSRSTTPLEVIIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMIGGQAYVQAQDGLSVKEWMRKQGIPDRVSDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKIAFLDGNPPERLCMPIVDHIRSLGGEVHLNSRIQRIELNDDGTVKNLLLNDGKAIEGDAYVFATPVDILKLLLPNNWKEIPYFKRLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDEDIIDATMNELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLVARGQKRMAQASVL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2726 581 SUPERFAMILY FAD/NAD(P)-binding domain 108 562 IPR036188 -
Glsi12g2726 581 NCBIfam 15-cis-phytoene desaturase 112 561 IPR014102 GO:0016117|GO:0016166
Glsi12g2726 581 Gene3D - 105 570 IPR036188 -
Glsi12g2726 581 Pfam Flavin containing amine oxidoreductase 119 560 IPR002937 GO:0016491
Glsi12g2726 581 PRINTS Flavin-containing amine oxidase signature 111 130 IPR001613 GO:0016491
Glsi12g2726 581 PRINTS Flavin-containing amine oxidase signature 542 559 IPR001613 GO:0016491
Glsi12g2726 581 PANTHER PROTOPORPHYRINOGEN OXIDASE 100 566 - -
Glsi12g2726 581 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 107 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2726 Glsi-ChrGlsi12 40678631 40690231 Transposed