Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2713 ATGTGCCCTAGAAAATGGAGGGTGGGCATCTGCATCGCTTCTCATAGGGCTTCGAATAATGAATGCTTATATCTCTCACCTATTGGGAAGTGCCTTGAAAAGAACCCGAGGTTAAGAAGTTACGTAGACATTGGGAATGAAGCATGTGGAAGAAAAGGAAGACCCCTAGCAGCAACCTTCATCTACATGGAGATTTTCATGGCCCTTGTTTCCTACACCATCTCACTGCATGACCACTTGATCAGTGTCTTCATGGGCACCCATCTGAAGCTGCATTTAGCTAAACTATCCTCATCTGTGCTCATTGCTGTCCCTAGTTTGTGGCTCAGAGATCTTGCCTCCATTTCTTTTGTCTCCACTGTCGGTATTCTCATCTTCTTATCAGTGGTTTTAACACCCATCTTCGGAGATGTTAAGCTTAATCCCAAGATCCCAGTTCTTGATCAGCTCCATAATATTCCTTCAATATCTGGCCTTTACATCTTTAATTATGGTGGACACGTTGTTTTCCCTGATCTACATAAATCCATGAAAGACCCTCCAAAGTTTACCAAGGCTTCCCTGTTCCATGAGCAGCAGAACCAAGAATCCAAGATGATAATAAGAGGCATTGCGTGTTTAGTTCTACTTCTAGTTATTCTAGCCCTTGCTCTTTCAGTGCCATATTTTGAGTATGTACTTGGTCTCACTGGTTCCCTTTTAAGCGTTGTTATCTGCTTGGTTTTCCCATGTGCTTTCTACACGAGGATATGTTGGGGTCAAATTCCAAAGCCTCTCTTAGTCATGAAGCTTTCTCTCATCACTTTTGGGTTTGTGATTGGAGTGATGGGCACCATTTCTTTCTCAAAGTTGCTACTGAAAAATCTACATGGAGCTCACTGA 882 0.4274 MCPRKWRVGICIASHRASNNECLYLSPIGKCLEKNPRLRSYVDIGNEACGRKGRPLAATFIYMEIFMALVSYTISLHDHLISVFMGTHLKLHLAKLSSSVLIAVPSLWLRDLASISFVSTVGILIFLSVVLTPIFGDVKLNPKIPVLDQLHNIPSISGLYIFNYGGHVVFPDLHKSMKDPPKFTKASLFHEQQNQESKMIIRGIACLVLLLVILALALSVPYFEYVLGLTGSLLSVVICLVFPCAFYTRICWGQIPKPLLVMKLSLITFGFVIGVMGTISFSKLLLKNLHGAH 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2713 293 PANTHER AMINO ACID TRANSPORTER 35 185 - -
Glsi12g2713 293 Pfam Transmembrane amino acid transporter protein 193 279 IPR013057 -
Glsi12g2713 293 Pfam Transmembrane amino acid transporter protein 29 185 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2713 Glsi-ChrGlsi12 40601608 40602826 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2713 191 293 Amino Acid or Auxin Permease AAAP Family AT5G16740 47.573 9.27e-16 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2713 12 40601608 40602826 Glsi12g2713 12 40601608 40602826 ECH