Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2697 ATGACGCAGGCTTTGGACGGTAATTTGCTGCTGAAAGAGAAGGAGGAGGAACCGGTGATATCAAACCGGTTTGCGATGGATCCGGTGGTGGATGTTAGGGGTTCTGACTGTTTGGCGGGTCTTGAGTGCTTGCTGAACATTTTCAGGGCCCTCGGAATGGGATCATGCCTCTCGGTGGCCCATTCCCTCCCCTATGCGCCGGAATCTACTTCTGACATTGCGAAGCGGAGGAGGAGATTAAGGAGTAGCGCCGCCTTTGATTCTAGGATGGAATTGAAACTACATACAGTCCCCGGCAGAATGTTCGTCAACGGATCCAGCGAGGTTGCGTCCTTGTTTTGTAAGCAAGGCAAAAAAGGGATCAACCAGGATGCTATGCTTGTTTGGGAGAACTTCTGTTCAAAGGACACCATCTTTTGTGGAGTTTTTGATGGGCATGGTCCTTATGGCCATAGGGTTGCAAAGAAAGTCAGGGATTCTTTCCCTTTAAAGTTTAGTGCTCAATGGGAATTGCATCATAACAATAAAGATGGACTACGTGGTATCAGAAGTGTGATGGAAAATCATAAGTCAGACGAGATTGAATTCAGAATGGCTGATGAAAAACCTACTGTCACTAATGAGTGCAACAATACAAATACATTAATGGCTCTGAAAGAATCTTTTCTGAAGGCTTGCAAGGTTTTGGACAAGGAACTGAAACTGCATCCTGATATCAATTGCTATTGCAGTGGGACTACAGCAGTCACCTTGGTCAAGCAGGGGCAGGATCTTGTTATCGGAAATGTTGGTGACTCAAGAGCTATATTGGGTACCAGAGATCATAATGATTCCCTTATTGCTGTTCAGTTGACCATTGACCTTAAGCCAAATCTTCCAAGGGAAGCGGAGAGGATCAAGCGCTGCAGAGGAAGGGTATTTGCTCTTCGTAATGAACCTGAGGTTGCTCGAGTTTGGCTACCTAATGCTGACTCCCCAGGCCTCGCTATGGCACGGGCTTTTGGAGATTATATCCTGAAGGACTTTGGCCTGATCTCTGTTCCAGATGTTTCTTATCACCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCCACAGATGGGGTTTGGGATGTTTTGTCAAACCAAGAAGTTGTAGACATTGTAGCATCTGCTTCACGGTCTTCTGCAGCTCGATCAGTGGTTGAGTCAGCTGTTCGAGCATGGAGGACAAAGTACCCTGCTTCAAAAGTTGATGATTGCGCTGTAGTTTGCCTCTTCTTTGATTCAGATTTAGACTTGAAGTCAGTATGCTCCAGAGAAAAGGAGATACCAGAGGTATCAATTAACCAACCTGAAATTGGCATTGGGGTAACTGCTCCTGAAAGTGTAGTTGACTGTTCAGAATTCTCTGAAACTTACCCTGAGCATTTGCCTATACTTGGGGAGAAGGGAGATAGAGTGGAAGCTGAATAG 1455 0.4564 MTQALDGNLLLKEKEEEPVISNRFAMDPVVDVRGSDCLAGLECLLNIFRALGMGSCLSVAHSLPYAPESTSDIAKRRRRLRSSAAFDSRMELKLHTVPGRMFVNGSSEVASLFCKQGKKGINQDAMLVWENFCSKDTIFCGVFDGHGPYGHRVAKKVRDSFPLKFSAQWELHHNNKDGLRGIRSVMENHKSDEIEFRMADEKPTVTNECNNTNTLMALKESFLKACKVLDKELKLHPDINCYCSGTTAVTLVKQGQDLVIGNVGDSRAILGTRDHNDSLIAVQLTIDLKPNLPREAERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDYILKDFGLISVPDVSYHRLTEKDEFVVLATDGVWDVLSNQEVVDIVASASRSSAARSVVESAVRAWRTKYPASKVDDCAVVCLFFDSDLDLKSVCSREKEIPEVSINQPEIGIGVTAPESVVDCSEFSETYPEHLPILGEKGDRVEAE 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2697 484 Pfam Protein phosphatase 2C 155 399 IPR001932 -
Glsi12g2697 484 PANTHER PROTEIN PHOSPHATASE 88 419 IPR015655 GO:0004722|GO:0006470
Glsi12g2697 484 SMART PP2C_4 103 419 IPR001932 -
Glsi12g2697 484 FunFam probable protein phosphatase 2C 33 104 424 - -
Glsi12g2697 484 ProSiteProfiles PPM-type phosphatase domain profile. 109 421 IPR001932 -
Glsi12g2697 484 CDD PP2Cc 109 421 IPR001932 -
Glsi12g2697 484 SUPERFAMILY PP2C-like 108 422 IPR036457 -
Glsi12g2697 484 Gene3D - 104 423 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2697 Glsi-ChrGlsi12 40513023 40516454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2697 79 422 PP2C-type Phosphatase Gene Family AT1G16220 60.169 2.83e-153 444