Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2691 ATGCAAACTATAACCTCTTTAGCCTACTTATGTCATTACAAATTGCATGCACCTTCTTCCTCACCAACCAAATCATCCTCCATTTTATCACCAGCTTGCCAACACACACCTTGTAGGGCTGCCTGTGAATCACTCATTACTATCAGTCTCAGTACTCCAACTCACCTCTTTCTTTCTTCCCTTCAATTCAGTATAGAGAAGGCCCACTCTGCTCGAGCCCTTGCCTACAACCTTAGCCTTTCCAATGCAACAACCCCTGACACGGCGTGGGTGTCCGCGTCGGAGAGGAAGCTTCTGGAAGGTTCCATAGAGGAATTTGGAGCAAATGTTGTGGTGGCCAAAGATGGAAGTGGGACCCACAAGACCTTAAGCGAGACACTGGATCAGCTTATGGCTGTTGGTGGTGGAAGGACTGTGATTCACGTAAAGGCAGGAACGTATCATGAGAATCTCAAGATTCCCACAAAGCAGAAGAACGTTATGTTAGTTGGGGATGGATTGGGAAAAACGGTCATTATTGGAAGCAGAAACTCGAAAGATGGCTGGACGACCTTCCAATCTGCCACTGTTGCTGCTATATATATGGTTGATGGATTCATGGAAAGGGACATAACATTCATGAACAGTGCGGGTCCTACAAATAACCAGGCTGTCGCTCTTCGTGTTGGCTCTGACAAATCAGTCATCTTCAGATGCTCCATAGTTGGCTACCAAGACACACTCTACACTCACTCTAAGCGTCAGTTCTACAGAGAAACCGACATCTATGGCACAGAGGACTTCATCTTCGGAAACTCTGCTGTGGTTTTCCCGGAACTGCAATTTCTACCCCAGAAACCCCTTACCTGGCCAGAACAACTTCATCACTGCACAAGGAAGGAGCAACCCAGATCTCAGAACACTGGCATCTCGATTCACAACTGCAATATAACTGCTGCTTCAGATTTGGTTGCTTTGAAATCTAAGGCTATTACTTTTCTTGGGAGGCCATGGAAGCAGTACTAG 1005 0.4647 MQTITSLAYLCHYKLHAPSSSPTKSSSILSPACQHTPCRAACESLITISLSTPTHLFLSSLQFSIEKAHSARALAYNLSLSNATTPDTAWVSASERKLLEGSIEEFGANVVVAKDGSGTHKTLSETLDQLMAVGGGRTVIHVKAGTYHENLKIPTKQKNVMLVGDGLGKTVIIGSRNSKDGWTTFQSATVAAIYMVDGFMERDITFMNSAGPTNNQAVALRVGSDKSVIFRCSIVGYQDTLYTHSKRQFYRETDIYGTEDFIFGNSAVVFPELQFLPQKPLTWPEQLHHCTRKEQPRSQNTGISIHNCNITAASDLVALKSKAITFLGRPWKQY 334
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2691 334 PANTHER PECTINESTERASE 57 334 - -
Glsi12g2691 334 SUPERFAMILY Pectin lyase-like 107 334 IPR011050 -
Glsi12g2691 334 Gene3D - 103 334 IPR012334 -
Glsi12g2691 334 Pfam Pectinesterase 109 334 IPR000070 GO:0030599|GO:0042545
Glsi12g2691 334 FunFam Putative pectinesterase 57 107 308 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi12g2691 Glsi-ChrGlsi12 40458659 40460578 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2691 90 334 Carbohydrate Esterase AT3G59010 62.041 3.65e-99 301