Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2678 ATGTCAGAATCAGATCAGGCCTCGGATTTTAAGACACCAAGATTGATTCTGAAGAAGGTTTTAGCCAAAAGTCTACAAGAAGGAAATGGAGTTTTTCTTAGAGGCATTGGAAGTTTGTGGGATATCGATCCTTTTGAGCAGTGGATGAGGGCAGGAAGAGGAATTGTCCATTCCGAAATGCCAGCAGGAGGAGGAACCCATTCTGGAGTGCAACTATGGATCAATTTACCGTCCAAAGATAAAATGATAGAACCAAGGTATCAAGAACTGGAGAGCAAAAACATAGCAAGAGCAGAAGAAGAAGGAGTAGAAGTTAGGGTTTTGGCAGGAGAAGCTTTTGGGGTGCATGCACCATTTTACACTCAAACCCCAATCATGTTTCTCGATATCACAGTGAAGCCCGCGGCTAGAATGCATCAGAGAATTCCAGAGTCATGGAACTCCTTTGTGTATGTGATAGAAGGAGAAGGGGTGTTTGGGTCCCACAGTTCATCTCCAGTGATGGCACACCATGTGGTGGTTCTGGGTGAAGGAGATGGTTTAAGTGTGTGGAACAAGAGGTCGTCAATGCCTTTGAGGTTTTTGCTTATTGCAGGAATGCCAGTGGCTCAGTGTGAACCTTTTGTTATGAATACACACTGA 642 0.4439 MSESDQASDFKTPRLILKKVLAKSLQEGNGVFLRGIGSLWDIDPFEQWMRAGRGIVHSEMPAGGGTHSGVQLWINLPSKDKMIEPRYQELESKNIARAEEEGVEVRVLAGEAFGVHAPFYTQTPIMFLDITVKPAARMHQRIPESWNSFVYVIEGEGVFGSHSSSPVMAHHVVVLGEGDGLSVWNKRSSMPLRFLLIAGMPVAQCEPFVMNTH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2678 213 Gene3D Jelly Rolls 47 213 IPR014710 -
Glsi12g2678 213 Gene3D Jelly Rolls 96 201 IPR014710 -
Glsi12g2678 213 Pfam Pirin C-terminal cupin domain 127 212 IPR008778 -
Glsi12g2678 213 CDD cupin_pirin_C 124 201 - -
Glsi12g2678 213 PANTHER PIRIN-RELATED 47 212 IPR012093 -
Glsi12g2678 213 Pfam Pirin 47 74 IPR003829 -
Glsi12g2678 213 SUPERFAMILY RmlC-like cupins 47 213 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2678 Glsi-ChrGlsi12 40364083 40365653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2678 13 213 Calmodulin-binding Proteins AT3G59220 46.899 2.75e-72 219