Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2661 ATGCTTTACACTTGCACAGGGCCTTTGGGTTTTCCCCATGCATCGTTGCTTATGTTTGCTTGTGTTGGCACTACAAAAGTGACAATGAAGAGGCCAAGCAGCTCTAATGGCTACTTCTGGCTTATCAATATGTTCATGTTATGTCTAGCCGTCAGGTCCCAGCTGACAACAGATTTTTACGAGTCATCGTGTCCTAACCTTTTTAAAATAGTGAGGAGAGAGGTCAGAAATGCTCTCATGAATGAGATGCGAATGGGTGCTTCTTTGATTCGTCTTCACTTCCATGATTGCTTTGTGAATGGTTGTGATGGATCAATACTACTAGATGGAGGTGGTGACGGTGAAAAGTCTGCTCTTCCAAACCTGAACTCTGTGAGGGGATTTGATGTCGTAGATACAATCAAAAGTTCAGTGGAGAGTGCATGTAATGGCACTGTCTCCTGCGCTGATATATTAGCCATTGCAGCCAGAGATTCTGTCCTCCTAAGTGGTGGTCCTTTATGGAATGTTCTTCTAGGACGGAGAGATGGATCAATCTCAAATGGGACACTGTCAAATCTGGCACTTCCTTCTCCCTTTGATCCATTGCATACTATTGTTTCCAAGTTTACCAATGTAGGCCTCAATCTATCAGACGTCGTTTCTTTGTCAGGTGTCCATACCATTGGCAGAGCAAGGTGTGCTTTGTTTAGCAATAGGTTGTTCAACTTCTCAGGCACAGGTGCACCAGACAGTACCCTGGACACTGACATGCTCACAGATCTGCAAAACTTGTGTCAAAAGGGAGATGGAAACACAACCAGTGTTCTTGACAGGGGCTCTGTGGATCTCTTTGACAACCATTACTTCCAGAACTTGCTCAGTGGAAAGGGCCTCCTCGGTTCTGATCAGATTCTGTTTTCAAGTGCCGAGGCCAATTCAACAACCAAGCCTTTGGTCCAAACTTACAGCGACAATAGTGCACTTTTCTTTCAGGACTTTGCGAATTCCATGATCAGGATGGGAAATATAAATCCAAAGACTGGGTCCGATGGAGAGATTAGGAAGAATTGCAGGGATGAATGCAGTAAGACAAATTTGAGATTGGAAGTGAAGACTCTGAAGAGACACCTTCAGCCAGATCCATTCCTTTTTCGTTTTTTGTTTTCTTCTTCTGGACCAAGATCCATTTTCCAAAAAGATGTCCTTGCAGCTTGCTAG 1200 0.4408 MLYTCTGPLGFPHASLLMFACVGTTKVTMKRPSSSNGYFWLINMFMLCLAVRSQLTTDFYESSCPNLFKIVRREVRNALMNEMRMGASLIRLHFHDCFVNGCDGSILLDGGGDGEKSALPNLNSVRGFDVVDTIKSSVESACNGTVSCADILAIAARDSVLLSGGPLWNVLLGRRDGSISNGTLSNLALPSPFDPLHTIVSKFTNVGLNLSDVVSLSGVHTIGRARCALFSNRLFNFSGTGAPDSTLDTDMLTDLQNLCQKGDGNTTSVLDRGSVDLFDNHYFQNLLSGKGLLGSDQILFSSAEANSTTKPLVQTYSDNSALFFQDFANSMIRMGNINPKTGSDGEIRKNCRDECSKTNLRLEVKTLKRHLQPDPFLFRFLFSSSGPRSIFQKDVLAAC 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2661 399 Pfam Peroxidase 71 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 ProSitePatterns Peroxidases proximal heme-ligand signature. 212 222 IPR019793 -
Glsi12g2661 399 SUPERFAMILY Heme-dependent peroxidases 54 352 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 Gene3D Peroxidase, domain 2 190 334 - -
Glsi12g2661 399 Gene3D - 59 352 - -
Glsi12g2661 399 PANTHER PEROXIDASE 72-RELATED 46 352 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Haem peroxidase superfamily signature 86 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Haem peroxidase superfamily signature 271 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 FunFam Peroxidase 190 334 - -
Glsi12g2661 399 FunFam Peroxidase 58 191 - -
Glsi12g2661 399 CDD secretory_peroxidase 54 352 IPR033905 GO:0004601|GO:0042744
Glsi12g2661 399 ProSitePatterns Peroxidases active site signature. 86 97 IPR019794 GO:0004601
Glsi12g2661 399 PRINTS Plant peroxidase signature 64 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Plant peroxidase signature 269 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Plant peroxidase signature 285 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Plant peroxidase signature 211 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Plant peroxidase signature 88 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 PRINTS Plant peroxidase signature 329 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2661 399 ProSiteProfiles Plant heme peroxidase family profile. 54 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2661 Glsi-ChrGlsi12 40148681 40152205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2661 29 352 Peroxidase AT5G19890 60.061 2.86e-137 394