Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2645 ATGGCTCTTCCACTGCATCTCCTTCTCCTCTGCTTACTGATTCTGCCACCTATCTGTGTTTTTGCCCAAACCAGAAGTAATTTAACTGTGGGTAGTTCTCTCACCGCTGATGGCAACTCCACATGGGTGGTTTCATCTTCTGGGGATTTCGCCTTTGGGTTTCAACAACTTGAAGATAATGATTTTTTTCTGCTTTCCATCTGGTATGCCAAGATTCGAGACAAAACCATCGTTTGGTATGCCAACAGAGACAATCCTGCTCCAAAGGGGTCAAAAGTACAGCTTACTGCTCAGGAAGGGCTTGTGCTTACTGATCCAGGTGGTGTGGAACTGTGGAAAACAGATACCCTTACCGGTACTGCTGCTCACGGTGCCTTGAACGACTCCGGCAACCTTGTTCTTGAAGATAGTAACTTTAATTCTGTCTGGGAGTCCTTCAAGAATCCTAGAGATACCATGTTGCCATCGCAGATACTGGAAAAGGAAGGAATGCTTTATTCTCGAACGTCTGAGACGAATTTCTCAAAGGGAAGGTTCCAGCTCCTTCTTCAGGATGATGGTAATCTTGTGTTACATTCTATAAACTTACCATCTGATTATGCTAATGAAAATTATTATGAAAGTGGTACTGTTGAATCAAATACATCAAGTCCTGGCCTTCAACTGGTCTTCAACAAATCAGGAGACATGTATATTTTGAGAGAGAACAATGACACATCCAGACTCTCGGACAGGACGATATCCTCTCCGACCCAATTTTATCTTCGAGCTACTCTTAATTTTGATGGAGTTTTCACTCTCTATCAACATCCCAGGAGTTCCTTTGGCAATGAAAGTTGGATCCCTCTCTGGTCTCGGCCAGATAATATCTGTACCAAAAGCCTTGTCAGTTCAGGTAGTGGTGTTTGTGGATATAATAGCATCTGCTCCTTGGGTGATAATAATAGGCCAATCTGTCAATGCCCAGGAGGGTATTCTCTACTTGATCCTAAAGACCGGTATGGTAGCTGTATACCAGATTTTATACAGGGCTGTAAAGAAGATGAGCTTAGTCGGAGGAAAGATCTATATGACTTTGTTGAGTTAACGAATACTGATTGGCCTCTCTCCGATTATGTTCTTCTAAGGCCTTTTACTGAAGAAACTTGCAAACAATCTTGTATGGAAGATTGCATGTGTGCTGTTGCCATTTTCAGATTAGGCGACAGCTGCTGGAAGAAGAAGTTACCGCTTTCAAATGGCAGATTTGACACGACTCTAAATGGTGGTAAGGCTTTTATTAAAGTGAGGAAAGACAATTCCTCCCTAATTGGTCCTCTTGGTCCTCCTCTGATCGAGAGAAAGAATCAGGACACTTTGGTTTTGGTAGGCTCCGTGCTTTTGGGTGGCTCTGCGTTTCTTAATCTCATATTGATTGGAGCAATGGTTTTGGGCTTTTCCTACACTTATCAGTGCCAGAAGAAGCTGAAAAGAATTAACCGAAGTGACAATGTTGTTGAAACCAATTTGCGTTGTTTTACTTATAAGGAGCTTGAAGAAGCTACAAATGGATTCAGGGAAGAGTTGGGAAGGGGAGCTTTTGGTGTTGTTTATAAAGGAACCATAAACATGGGCTCTACAATTCATGTGGCAGTCAAAAGATTGAACACCTTTTTGTTGAAAGAGATTGAGAAAGAATTCAAAAATGAAGTAAATGTGATTGGTCAGACCCATCATAAGAATTTGGTTCGATTGCTCGGATTCTGTGATGAGGAAGCAGAAAGGTTACTGGTATATGAGTACATGAGCAATGGCACATTGGCAAGCTTTCTGTTCAATGACTTGAAACCCAGTTGGAACCTAAGACTTGGGATGGCATTTGGGATTGCGAGAGGACTTGTTTATTTACATGAAGATTGCAGTACCCAGATCATCCACTGTGACATAAAGCCTCAGAACATACTTCTTGATGACTACTTCAATGCTCGAATCTCTGACTTTGGATTGGCCAAGCTCTTGAACATGAATCAGAGCCGAACACATACTAACATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAAAATATGCCTATCACTGCCAAAGTTGATGTCTATAGCTTTGGTGTATTGCTGCTCGAGATTATTTGTTGCAGAAAAAGTGTGGATATGGAGGCAGACAACGAGGAGAAAGCAATCTTAACTGACTGGGCTCATGACTGCTACGCACAAGGTTCTCTAGAAGCTTTGGTTGAACATGATAGGGAGGCATTGGATGACCGGAAGAACCTGGAGAAGTTAGTAATGATTGCCATGTGGTGTGTTCAAGAGGACCCAACTCTTAGACCCACCATGAGAAAGGTTGCACAGATGCTTGAAGGCGTGGTTGAAGTGCTTGTTCCACCATGCCTGTCCGCAAATAGTGTGAGTCAAGATCAGTATTACTCACTTACACTATGA 2445 0.4237 MALPLHLLLLCLLILPPICVFAQTRSNLTVGSSLTADGNSTWVVSSSGDFAFGFQQLEDNDFFLLSIWYAKIRDKTIVWYANRDNPAPKGSKVQLTAQEGLVLTDPGGVELWKTDTLTGTAAHGALNDSGNLVLEDSNFNSVWESFKNPRDTMLPSQILEKEGMLYSRTSETNFSKGRFQLLLQDDGNLVLHSINLPSDYANENYYESGTVESNTSSPGLQLVFNKSGDMYILRENNDTSRLSDRTISSPTQFYLRATLNFDGVFTLYQHPRSSFGNESWIPLWSRPDNICTKSLVSSGSGVCGYNSICSLGDNNRPICQCPGGYSLLDPKDRYGSCIPDFIQGCKEDELSRRKDLYDFVELTNTDWPLSDYVLLRPFTEETCKQSCMEDCMCAVAIFRLGDSCWKKKLPLSNGRFDTTLNGGKAFIKVRKDNSSLIGPLGPPLIERKNQDTLVLVGSVLLGGSAFLNLILIGAMVLGFSYTYQCQKKLKRINRSDNVVETNLRCFTYKELEEATNGFREELGRGAFGVVYKGTINMGSTIHVAVKRLNTFLLKEIEKEFKNEVNVIGQTHHKNLVRLLGFCDEEAERLLVYEYMSNGTLASFLFNDLKPSWNLRLGMAFGIARGLVYLHEDCSTQIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSRTHTNIRGTKGYVALEWFKNMPITAKVDVYSFGVLLLEIICCRKSVDMEADNEEKAILTDWAHDCYAQGSLEALVEHDREALDDRKNLEKLVMIAMWCVQEDPTLRPTMRKVAQMLEGVVEVLVPPCLSANSVSQDQYYSLTL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2645 814 ProSitePatterns Protein kinases ATP-binding region signature. 522 546 IPR017441 GO:0005524
Glsi12g2645 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 22 147 - -
Glsi12g2645 814 CDD STKc_IRAK 522 789 - -
Glsi12g2645 814 SMART serkin_6 516 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g2645 814 SUPERFAMILY Protein kinase-like (PK-like) 498 788 IPR011009 -
Glsi12g2645 814 CDD B_lectin 44 149 IPR001480 -
Glsi12g2645 814 SMART blect_4 33 149 IPR001480 -
Glsi12g2645 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Glsi12g2645 814 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Glsi12g2645 814 FunFam Serine/threonine-protein kinase 150 294 - -
Glsi12g2645 814 FunFam S-receptor-like serine/threonine-protein kinase 485 594 - -
Glsi12g2645 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 795 - -
Glsi12g2645 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 210 IPR036426 -
Glsi12g2645 814 Gene3D Phosphorylase Kinase; domain 1 480 594 - -
Glsi12g2645 814 Gene3D - 20 148 IPR036426 -
Glsi12g2645 814 PIRSF SRK 1 812 IPR024171 GO:0004674
Glsi12g2645 814 Gene3D - 149 277 IPR036426 -
Glsi12g2645 814 FunFam Uncharacterized protein 149 278 - -
Glsi12g2645 814 Gene3D Transferase(Phosphotransferase) domain 1 595 793 - -
Glsi12g2645 814 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 799 - -
Glsi12g2645 814 ProSiteProfiles Protein kinase domain profile. 516 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g2645 814 Pfam D-mannose binding lectin 76 159 IPR001480 -
Glsi12g2645 814 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2645 Glsi-ChrGlsi12 39962996 39965440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2645 502 789 Receptor kinase-like Gene Family AT1G60800 44.218 2.01e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi12g2645 PK_Tyr_Ser-Thr 2.8e-48 CL0016