Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2641 ATGGTGACTTACCCTGGAGGATTCACTGATCATCCACACAGAGGTTTTGAGATAGTCACCTATATGCTAGAGGGAGCCATTGTTCATCAAGATTTTGCTGGAAATAAGGGAGCAATAAGAGCTGGTGATGTTAAGTGGATGACTGCAGGAAGAGGAATAATTCACTCTGAAATGCCTGCAGGAGAGGGAACCCATACAGGAGTGCAGTTATGGATCAATCTATCCAAAGAAGATAAAATGATTGAACCAAAGTATCAAGACTTGCCAAAAGAGAACATTCCAAGAGAAGAGAAAGATGGGGTTGAAGTAAAGAGATTGGCTTTGGATATGGCTATGGCTTTCCCACTGCATCCCATCTTCCTCTGCTTACTGAGCCTGCCAACTATTTGTGTTTTAGCCCAAACCAGAAGTAATATACTTGTCGGTGATTCTCTCTTCGCAGGAGAAGGCTCCTCCTCGTGGGTGGTTTCCCCTTCTGGGGAATTTGCCTTTGGGTTTCAACCACTTGAAGATAATGAATTTTTCTTGCTTTCCATCTGGTATGCCAAGATTCCAGAAAAAACCATAGTTTGGTATGCGAATGGGGACAAACCTGCTCCAAAGGGGTCAAAAGTACAGCTTACCGCCGAAGGAGGGCTTCTGCTTACTGCTTCTAATGGGGGGCAACTGTGGAAACCAGCTACCCTTACTGGTACTGTTGCTCGTGGTGCCTTGAACGACTCTGGCAACTTTGTTCTTGAAGATAGGACCCTTAGAACTGTCTGGGAGACATTCCAGGATCCTAGAGACACCGTGTTGCACTTGCAGGTTCTGAAAATGGGAGGAATGCTTTGGTCTCGAATATCAGAGACAAATTTCTCAAAGGGAAGGTTCCAGCTCCTTCTAAATGATGATGGTAAGCTTGTGTTTCATTCTATAAACTTACCATCCGGGTATGCTAATGAAAATTATTATGAAAGTGGTACTATTGAATCTAATTCATCAAGTACCGGCGTTCAACTGGTCATGTATATTTTGAGAGACAACAATGACACATTCAACCTCACAAACGGGATGATGGCCTCTCCAACGCAATATTATCTTCGAGCTACTCTTAATTTTGATGGAGTTTTCACTCTCTATCAACATCCCAAGAGTTCCTTTGGCAATGATAATTGGACCCCTCTCTGGTCTCTGCCAGATAATATCTGTACCGCAAGTCCTGTCACTTATGGTAGTGGCATTTGTGGATATAATAGCATCTGCTCCTTAAATGACTATAATAGGCCAATTTGCCAGTGCCCGAAAGGGTATTCTCTACTTGATCCTAAAGACCCGTATGGTAGCTGTAAACCAGATTTCATACGGGGTTGTGAAGAGGATGAGCTTAGTAAGAGCAAAGATCTATATGAGTTTGTGGAGTTAATAAATACTGATTGGCCTCTCTCGGATTATGTGCTTCAAAAACCTTTTACTGAAGAAGATTGTAAACAGTCTTGTATGGAAGATTGCATGTGTGCGGTTGCCATTTTCAGATTAGGTGACAGCTGCTGGAAGAAGAAAACACCGCTTTCAAATGGAAGAATTGACTCCAGTCTAAATGGTGGTAAAGCTTTTATCAAAGTGAGGAAAGACAATTCCACCCTCATTGGTACTCTTGGCCCTTCGCTCATCAAGAGAAAGAACCAGAGCACTTTGGTTTTGGTGGGCTCTGTGCTTTTGGGTGGCTCTGCATTTATTAATCTCATATTGATCGGAGCAATCTGTCTGAGCTTTTCCTTCGTTTACAAGTGGTACAAGAAGTCTAAAAAAATTAACCGAAGTGACACTTCTGTTGAAACCAATTTGCGTTGTTTTACTTACACGGAGCTTGAAGAAGCTACAAATGGGTTCAGGGAAGAAAAAAGTGTGGATATGGAGGCAGAGAAGGAGGAGAAGGCAATCTTAACTGACTGGGCAAATGACTGCTACTCACAATGTTCTCTGGATGCGTTGGTTGAAGACGATAAGGAGGCATTGGATGACAGGAAGAACCTGGAGAAATTAGTAACGATTGCCATATGGTGTATTAAAGAGGACCCAGCACATAGACCTACCATGAGAAAGGTTGCAGAGATGCTTGCAGGAGCTTCCGAAGTGCATGTTCCGCCATATACAGTGTGA 2142 0.4295 MVTYPGGFTDHPHRGFEIVTYMLEGAIVHQDFAGNKGAIRAGDVKWMTAGRGIIHSEMPAGEGTHTGVQLWINLSKEDKMIEPKYQDLPKENIPREEKDGVEVKRLALDMAMAFPLHPIFLCLLSLPTICVLAQTRSNILVGDSLFAGEGSSSWVVSPSGEFAFGFQPLEDNEFFLLSIWYAKIPEKTIVWYANGDKPAPKGSKVQLTAEGGLLLTASNGGQLWKPATLTGTVARGALNDSGNFVLEDRTLRTVWETFQDPRDTVLHLQVLKMGGMLWSRISETNFSKGRFQLLLNDDGKLVFHSINLPSGYANENYYESGTIESNSSSTGVQLVMYILRDNNDTFNLTNGMMASPTQYYLRATLNFDGVFTLYQHPKSSFGNDNWTPLWSLPDNICTASPVTYGSGICGYNSICSLNDYNRPICQCPKGYSLLDPKDPYGSCKPDFIRGCEEDELSKSKDLYEFVELINTDWPLSDYVLQKPFTEEDCKQSCMEDCMCAVAIFRLGDSCWKKKTPLSNGRIDSSLNGGKAFIKVRKDNSTLIGTLGPSLIKRKNQSTLVLVGSVLLGGSAFINLILIGAICLSFSFVYKWYKKSKKINRSDTSVETNLRCFTYTELEEATNGFREEKSVDMEAEKEEKAILTDWANDCYSQCSLDALVEDDKEALDDRKNLEKLVTIAIWCIKEDPAHRPTMRKVAEMLAGASEVHVPPYTV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2641 713 Gene3D Transferase(Phosphotransferase) domain 1 624 710 - -
Glsi12g2641 713 Gene3D - 132 260 IPR036426 -
Glsi12g2641 713 SMART blect_4 136 261 IPR001480 -
Glsi12g2641 713 Pfam D-mannose binding lectin 188 268 IPR001480 -
Glsi12g2641 713 ProSiteProfiles Bulb-type lectin domain profile. 136 259 IPR001480 -
Glsi12g2641 713 SUPERFAMILY RmlC-like cupins 3 109 IPR011051 -
Glsi12g2641 713 Pfam Pirin 6 72 IPR003829 -
Glsi12g2641 713 CDD cupin_pirin_N 4 74 - -
Glsi12g2641 713 CDD PAN_AP_plant 457 535 - -
Glsi12g2641 713 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 133 259 - -
Glsi12g2641 713 Gene3D Jelly Rolls 1 113 IPR014710 -
Glsi12g2641 713 SUPERFAMILY alpha-D-mannose-specific plant lectins 175 322 IPR036426 -
Glsi12g2641 713 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 627 710 - -
Glsi12g2641 713 FunFam Serine/threonine-protein kinase 262 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2641 Glsi-ChrGlsi12 39927775 39934401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2641 6 117 Calmodulin-binding Proteins AT3G59220 60.177 1.82e-38 142