Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2613 ATGGCTTTCGAAGCATTGTACACAAAATTAACGACAATGATGACCTCTGATCACGCTTCAGTGGTCTCAATGAATTTATTTGTTGCACTTCTTTGTGCTTGCATCATAATCGGTCATTTGCTGGAGGAGAACCGATGGATTAATGAATCCATCACTGCCCTTCTTATTGGTATCTGTACTGGGGTTTTTATACTGCTTACAACTGGAGGAAAAAGCTCCCATATATTAGTTTTCAGTGAAGATCTTTTCTTTATTTACCTTCTTCCGCCGATCATTTTCAATGCCGGGTTTCAGGTGAAGAAGAAACAATTTTTTCGGAATTTTATGACTATCATGCTCTTTGGTGCAGTTGGCACTTTAATATCCTTCGCCATCATATCACTAGGTGCTATACACTTTTTCCCGAAATTGGATATTGGATCCCTCAAGCTTGGCGATTATCTTGCACTTGGAGCAATATTTTCCGCAACAGATTCTGTTTGCACCTTGCAGGTGCTTAATCAGGATGAGACACCTTTATTATACAGCCTGGTCTTCGGGGAGGGGGTAGTAAATGATGCTACATCTGTAGTGCTCTTGAAAGCAATACAGAACTTTGACCTCTCTCACATCGACTTTACCGCTGGTTTACACTTATTTGGAAACTTTTTCTATTTATTTACTGCAAGCACTGTGCTGGGAGTCTTAGCTGGATTGCTTAGCGCATACATCATTAAAAAGCTTTATTTTGGCAGGCACTCTACTGACCGTGAGGTTGCTCTGATGATACTCATGGCCTACCTTTCATATATGCTAGCTGAACTATTTAATTTAAGTGCCATTCTGACCGTGTTCTTTTGCGGAATTGTCATGTCTCACTACACATGGCATAATGTGACTGAAAGTTCAAGAATAACAACTAAGCATGCTTTTGCTACTTTGTCATTCATTGCTGAGATCTTTATCTTCCTTTACGTTGGGATGGATGCACTGGATATAGAGAAGTGGAGATTTGTACGTCAAAGCCCTGGAAAATCAATTGGGATCAGTTCATTGCTGTTGGCACTTATCTTAGTCGGAAGAGCAGCCTTTGTTTTCCCTCTGTCCTTCTTATCCAACTTGCCTAAGAAGTCTCAATTTGAGAAAATCGAGTTCAAGCAACAAGTAACAGTTTGGTGGGCGGGTCTTATGCGCGGAGCTGTTTCTCTGGCACTCGCATATAATCAGTTTACCAGGCTAGGCCATACTAAATTGCGTGAGAATGCCATCATGATCACTAGTACCATCACAGTTATACTCTTCAGCACTGTGGTGTTTGGGTTGATGACTAAGCCACTTGTAAGGTTATTGCTTCCTCAATCAAAACAAATGACCAGCGTTCCGTCCCCACCATCTACTCCTAAATCATTCACTGTGCCACTTCTTGGCAATGACCAGGAATCAGGGGCCAACGGTGGCACACAGAATGTGCGTCGCCCAAGCAGATTGCGTCTACTCCTAAGCCTTCCTGCTCGTGGCGTCCACCATTATTGGCGAAAATTTGATGATTCTGTCATGCGACCTGCATTTGGTGGGCGGGGTTTTGTACCCTTCGTTCCTGGGTCACCCCTTGAACAGAGTGTTCACCAATGGCAATAA 1617 0.428 MAFEALYTKLTTMMTSDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALLIGICTGVFILLTTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFAIISLGAIHFFPKLDIGSLKLGDYLALGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLLKAIQNFDLSHIDFTAGLHLFGNFFYLFTASTVLGVLAGLLSAYIIKKLYFGRHSTDREVALMILMAYLSYMLAELFNLSAILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFIAEIFIFLYVGMDALDIEKWRFVRQSPGKSIGISSLLLALILVGRAAFVFPLSFLSNLPKKSQFEKIEFKQQVTVWWAGLMRGAVSLALAYNQFTRLGHTKLRENAIMITSTITVILFSTVVFGLMTKPLVRLLLPQSKQMTSVPSPPSTPKSFTVPLLGNDQESGANGGTQNVRRPSRLRLLLSLPARGVHHYWRKFDDSVMRPAFGGRGFVPFVPGSPLEQSVHQWQ 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2613 538 NCBIfam sodium/hydrogen exchanger 3 22 448 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi12g2613 538 Gene3D - 22 450 IPR038770 -
Glsi12g2613 538 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi12g2613 538 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi12g2613 538 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi12g2613 538 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi12g2613 538 PANTHER SODIUM/HYDROGEN EXCHANGER 15 516 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Glsi12g2613 538 Pfam Sodium/hydrogen exchanger family 27 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2613 Glsi-ChrGlsi12 39708003 39711903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2613 3 536 Antiporters AT3G05030 74.768 0.0 825