Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2577 ATGGGTTGTGTCCATGGCAAGTGTTGTAGCCGCTACCCGCCGCCATCAGAGGGAGGTTCCCGGGACTACCGAGAACTCGCACTGTCCCGTGCACAACGGAAGCACATACTTACTCAGAAATCGTTGGAGTTTGTTCCGGTTCCTTCCCACAACTTCATTCTGGAATACTCTGTTCTCACGCAGCGGGGATACTACCCTGACTCGCCCGATAAAGAAAACCAAGATAGTTTCTGCATTAGGACGCAAATTCAAGGTAACCCAAGTATCCATTTCTTTGGTGTCTATGATGGGCATGGTCAATTTGGTAGCCAGTGTTCGAACTTTGTTAAGGATAGGTTGGTAGAAAAATTATCAAATGACCCCGCATTGTTGGAGGACCCCGTTAGAGCTTATAATTCAGCATTCATAACAACAAATTACGAACTACATCATAGCGAGATTGATGATTCTATGAGCGGCACTACTGCAATCACTGTGCTTGTTATTGGAGACACGCTTGTTGTTGCTAATGTTGGCGATTCGAGGGCAGTGTTAGCTGTTAAGGATGGGAATCGCATTATTGCTCGGGACTTATCCTCTGATCAGACACCATTTAGAAGAGATGAATATGAGAGAGTGAAGCTTTGTGGGGCAAGGGTGCTAAGTGTTGATCAGGTGGAAGGGCTTAAGGATCCGAATATCCAGACTTGGGGCGATGAAGAGAGTGAGGGCGGTGATCCTCCGAGGTTGTGGGTTCCAAATGGGATGTGTCCTGGAACTGCATTTACAAGGAGTGTGGGAGATAGTTTAGCCGAGACTATTGGTGTCATTGCTATTCCCGAGGTGTCAATGGTTCAGCTTTCACCTAATCATCTTTTCTTTGTTGTTGCAAGTGATGGTGTATTTGAGTTCTTATCTAGCCAGACTGTTGTTGATATGGCAGCAAGCTATGCAGATCCCCGTGATGCATGTGCTGCAATTGCTGGAGAGTCATATAAACTATGGTTGGATCATGAGAACCGTACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCTAATTCAGTTACATGTGGTATCGGAGCAGGTGAGATCAATGTTAGTACTGTGATGAGGGTCAAGAGAGGAACATCTGAGATATCTACTACCACTGGGTCAGATGTTTATCGTTCCGTGGGGAGTGATTTCTCTCATTTACAGTCCTGTCAGAATGTAGTCTCAATGAGAAGCCCAGCCATAGTGGTCCCCTCTCCAACATGTCAAAGACCGGTTGAATTGTGA 1269 0.4555 MGCVHGKCCSRYPPPSEGGSRDYRELALSRAQRKHILTQKSLEFVPVPSHNFILEYSVLTQRGYYPDSPDKENQDSFCIRTQIQGNPSIHFFGVYDGHGQFGSQCSNFVKDRLVEKLSNDPALLEDPVRAYNSAFITTNYELHHSEIDDSMSGTTAITVLVIGDTLVVANVGDSRAVLAVKDGNRIIARDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPNIQTWGDEESEGGDPPRLWVPNGMCPGTAFTRSVGDSLAETIGVIAIPEVSMVQLSPNHLFFVVASDGVFEFLSSQTVVDMAASYADPRDACAAIAGESYKLWLDHENRTDDITIIIVQIKGLSNSVTCGIGAGEINVSTVMRVKRGTSEISTTTGSDVYRSVGSDFSHLQSCQNVVSMRSPAIVVPSPTCQRPVEL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2577 422 Gene3D - 49 347 IPR036457 -
Glsi12g2577 422 PANTHER PROTEIN PHOSPHATASE 73 344 IPR015655 GO:0004722|GO:0006470
Glsi12g2577 422 CDD PP2Cc 71 345 IPR001932 -
Glsi12g2577 422 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Glsi12g2577 422 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Glsi12g2577 422 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Glsi12g2577 422 SUPERFAMILY PP2C-like 42 347 IPR036457 -
Glsi12g2577 422 Pfam Protein phosphatase 2C 77 320 IPR001932 -
Glsi12g2577 422 SMART PP2C_4 51 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2577 Glsi-ChrGlsi12 39472982 39476210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2577 1 350 PP2C-type Phosphatase Gene Family AT3G06270 74.857 0.0 529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2577 12 39472982 39476210 Glsi12g2577 12 39472982 39476210 ECH