Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2567 ATGATGACTGCAAGAGAAAGGAGTCAAACGGAACTTACATACTCTGGCAAAATGAAGGTTAAAGAAACAGCCGAAGAAAATCCAAATCCGGCTCGAAACTCAGTAGCTGAATGCGATGGCCACACTAGCGAAACGAGGATTGCTGTTCTGCTTTTCATACTTTCATTGTTTCTGCGACAGCAGGAATATCTTATAACTTCATCAAGCTTAGATCTAAATGGAGAACTTGAGAACATGATTGTAGAGGAAAACCTGGTAGGTACTGAACTGGCAATGAATAATGCCAGTGGGGGGGAAGAAATAGAGTTTGCCCGCGAACCATACATTGGGTTAGAATTTGAATCAGCAGATGATGCACTTCAGTTTTACACGTCATATGCAAAGCAAGCTGGATTTAAAGTTCGGATTGGTCAGTTGTATCGATCAAGAACTGATGGCTCAGTTTCTTCTAGAAGGTTCGTGTGCTCAAAGGAGGGATATCAGCTCAGTTCAAGAACAGGTTGTCCAGCATTTATAAGAGTACAAAGACGTGATTCTGGGAAGTGGGTTGTTGATCATTTCCTGAAGGGCCACAATCATGAGCTTGAACCTGAAGGTGAAAGGTACCCTCCTAATTTGCAGCAGAAGGATGCTACAGCTATAAAACCTTTTACTGATGTGTCCCACAGGTCAAGGAAAAAGGTGCTTGAAGAAGCTAAGGATGAGCTCTCTTGTCCCTTTGGCATAATTAATTTCAAGCGTCTGAGAAAAGGAGATGAAGGACAGTCCAAGGTTGAACCATATGTAGGTCAAGAATTCAGTTCAGCTAATGAAGCTTACCAATTTTATCATGCATATGCAGCATGTGTGGGTTTCAGAATTCGTATTGGTCAACTGTTTCGTTCTAAGAATGATGGATTAATCACATCCCGAAGATTTGTGTGCTCAAAAGAGGGATTTCAGCACCCTTCTAGAGTTGGTTGTGGGGCTTATTTGAGAGTTAAGAGACAACCATCTGGAAGGTGGGTAGTGGACCGTCTTCATAAGGATCATAATCATAATCTTGACCCTGAAAAAGAGGGTAGGCAAAAAATTCTACCTTCTTTAAATATTTTGACAGAGGAGGTTAACGCTGGATTGGTAAGTGGTGACATATTTAGGATAGATAACTACCCTGTTCCTAGAGAATCATGGAGTAGCTCTCAGGAACTCAGGAATTTAATGCTATGGAGTCTAAGGGAAACTGCATGTAAATACGTAGATGCTGGTGCAACATCTCTTGATAAGTACAAACTTGCCCATGAGATTTTGCAAGAGGGTGGGAAGAAGCTATGTTGGCATAGTGCTGTGCCAGAGGACCAGATGCCCAACCTTCTTGCTTTATACCTCGGCTTTTTGGCTTTGTTAAGTATAATGGCAATTTACTTTGATTTATGCAAAACCTCAGAAGCTGAGCCAACATGCATATTAGGAGGAATCAAGGAAGAGTCACAAGCCATATGCTTTTTACTACAATATACGAAAACATTAGATTTCTTTTCAGAGTGGAATGGCTCTTTCTTCCCACAACAGCCAAAAGAATAA 1563 0.412 MMTARERSQTELTYSGKMKVKETAEENPNPARNSVAECDGHTSETRIAVLLFILSLFLRQQEYLITSSSLDLNGELENMIVEENLVGTELAMNNASGGEEIEFAREPYIGLEFESADDALQFYTSYAKQAGFKVRIGQLYRSRTDGSVSSRRFVCSKEGYQLSSRTGCPAFIRVQRRDSGKWVVDHFLKGHNHELEPEGERYPPNLQQKDATAIKPFTDVSHRSRKKVLEEAKDELSCPFGIINFKRLRKGDEGQSKVEPYVGQEFSSANEAYQFYHAYAACVGFRIRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRVKRQPSGRWVVDRLHKDHNHNLDPEKEGRQKILPSLNILTEEVNAGLVSGDIFRIDNYPVPRESWSSSQELRNLMLWSLRETACKYVDAGATSLDKYKLAHEILQEGGKKLCWHSAVPEDQMPNLLALYLGFLALLSIMAIYFDLCKTSEAEPTCILGGIKEESQAICFLLQYTKTLDFFSEWNGSFFPQQPKE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2567 520 MobiDBLite consensus disorder prediction 1 37 - -
Glsi12g2567 520 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 42 233 - -
Glsi12g2567 520 Pfam FAR1 DNA-binding domain 121 196 IPR004330 -
Glsi12g2567 520 Pfam FAR1 DNA-binding domain 274 349 IPR004330 -
Glsi12g2567 520 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2567 Glsi-ChrGlsi12 39406855 39412873 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Glsi12g2567 FAR1 1.7e-19 CL0274