Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2529 ATGAAAGGCATGCTTGAGGAGCAACCATCTCCTGAAAATTCAAAGTATGCATCAAGCAGTGGTCTGTCTAGAGATGATAAGGAGATGGGCTTCAGTGCTGCCATATCTAAGCAGCAATATATTTTGGTGAATAACTCTGCTTTTCATTGCTCACCCTTCAAACTTGACCTAAACTCCGCTCGCATGGCCATGGCAGAGATGGTGGGTACCTTCATTTTGATGTTCTGTGTATGTGGAATCATTGCAAGCACAGAGTTCCAAAATGGACAAGTGGGTCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTTGTGATAATCTTCTCTATAGGGCCCATCTCTTGTGCACATGTTAACCCAGCAGCCACAATAGCTTTTGCAACATTTGGTCAATTTCCATGGTTCAAGGTTCCAGTTTACGTGCTAGCACAGACAGTGGGTTCTGTGTTGGCAACATATATTGGTAGCCTTGTCTACGGCATTAAATCAGATGTCATGATGACGAGACCAATCCAAGGGTCTGTCTCTGCCTTCTGGGTGGAGCTTATTGCAACTCTCATCATAATGTTCCTGGCAGCAGCTCTGACAAGTGAACCTCAATCAGTGGGCCATTTATCTGGCTTTGTTGTTGGAATAGCTATTGCACTTGCAGTGTTAATCACAGGCCCCGTTTCAGGTGGATCTCTGAACCCTGCAAGATCATTAGGCCCAGCAATTCTCTCATGGAAATTTAAGGACATCTGGATATACACCACAGCCCCCATTGCCGGAGCTGTAGCAGGTGCTCTATTGTTTCGATTTCTACGCATTCAACACCAGCCCTGCAGAACTTTCTCCTCCTCAGACTCAAGTGATATCGGCCGATCCACACCCTTGTGCGAGAGTTAG 891 0.4602 MKGMLEEQPSPENSKYASSSGLSRDDKEMGFSAAISKQQYILVNNSAFHCSPFKLDLNSARMAMAEMVGTFILMFCVCGIIASTEFQNGQVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAATIAFATFGQFPWFKVPVYVLAQTVGSVLATYIGSLVYGIKSDVMMTRPIQGSVSAFWVELIATLIIMFLAAALTSEPQSVGHLSGFVVGIAIALAVLITGPVSGGSLNPARSLGPAILSWKFKDIWIYTTAPIAGAVAGALLFRFLRIQHQPCRTFSSSDSSDIGRSTPLCES 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2529 296 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2529 296 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2529 296 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2529 296 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2529 296 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2529 296 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2529 296 Pfam Major intrinsic protein 59 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2529 296 SUPERFAMILY Aquaporin-like 58 278 IPR023271 -
Glsi12g2529 296 Gene3D Glycerol uptake facilitator protein. 25 283 IPR023271 -
Glsi12g2529 296 MobiDBLite consensus disorder prediction 1 23 - -
Glsi12g2529 296 PANTHER AQUAPORIN NIP2-1 45 275 IPR034294 -
Glsi12g2529 296 MobiDBLite consensus disorder prediction 277 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2529 Glsi-ChrGlsi12 39106955 39108423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2529 64 284 Major Intrinsic Protein MIP AT5G37820 38.739 1.11e-54 178