Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2515 ATGCGAGCTTCTCGCAAAGCCGAAGCCAATCACTGCTCTCTTCTGACGAGAAGAGAGAGAACGAAGAAGATGGCGATGGTAGAGAGCATTGTCAGTCTCTTTCTTCTCATTATGCTTATTCTCATCATCGTCCTCATCGTCTTTGCCTGTAAACCATGGCGCTTCGTCTTCTCTTCGCGTTCCCACGCCTCCATCAAGGTTAATGACCTGGAGAGGCCCCTTGTCTTAGATGATGCAAATGTGGTACATAACCAGAGCAATGAATTGCCCAGAGACTATGATCTTGAGGGTGCATGCTGCACCAATGAAGGTCATTTTCGCTCACCGCGAACCCGTGGTCTTGTTTATAAGCAAAGGCTTCCTGCTGCTTCTCCCCATGTACCTCAGGGTGATAGTTTGGTTTTAGATGTAGCTTCTAATCCTGTAGAAGATGTTTCCGTTGGTCAGACACTAAAGCTTTCTACAGCCCAGTTGGCAGAATTTCAAAAGCACAGTAGAAATGTTGAAATTGACAGACTGCAGGACTTTGTACAAAGAGATATCTTAGATCATAGAAGTTGCCTCACTCTGGAGGTTATAACTGGTCCTTCTAGTGGACTTTGTTGTTCTGTACAATCAACAATTCCCTCAAGGCTACCACTGACCCTTGGAAGAGTTTCTCCAAGTGATTTATTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCACTAATAAACTGGAATTTGAATAAAATGAAATGGGAGTTGGTAGATATGGGTAGTCTAAATGGAACACTTTTGAATTCTCAACCAATAAACCATTCAGACACTGGTGGTAGGCACTGGGGTAATCCGGTTGAGCTTGCTAATGGAGATATCATAACACTTGGAACTACATCGAAAGTAATTGTTCATATTACTTCACAAAATAGAAATCACATTCCCTTTGGAGTAGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGAGGGAAAAAGCTGCCCATGGAAGATGTTTGCTATTATCAGTGGCCTCTGCCTGGACTGGATCAGTTTGGGCTGTTTGGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCCAGATCTGCTAGCAAACTTTTCCCTGAGATAGTTGCTAATATACTATCGGATTCATTAAAAAGAGAGAAGGTTTTATCATTCTGTGATGCTTCAAATGTTCTTAGAGACGCATTTTCTCAAACAGAAGCACGCATAAATCACCATTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGATGGCGATGAAAACTTCTTTGCGCAATGTGCAAATGTTGGAGACTCTGCCTGTGTAGTGAATGTTAATGGGAAAGATATCAAGATGACTGAAGATCATAAAATAACTAGTTATTCTGAAAGACTCCGAATCGAACAGACAGGCGAACCATTGAGAGATGGGGAAACACGTCTTTACGGCATAAATCTTGCAAGGATGCTTGGGGATAAATTTCTTAAACAGCAGGATTCCCGGTTCAGTTCAGAGCCTTATATAAGTCAAGTCGTACGTATTGATCAAGCAAGCAGGCCTTTTGCCATACTAGCAAGTGATGGGTTATGGGATGTCATCAGCATGAGGAAGGCAATGCAGCTAGTGCTTCAGATGAGGGAGAGATTCTCCACAGATGGGGAGAATTTAGCAGAAAAGATTGCAAATTCCTTGTTGGGTGAGGCTAGAACACACAAAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATACCTTCCCCAGACTTCCTTGTAAATCTGCGTCCTAG 1785 0.4297 MRASRKAEANHCSLLTRRERTKKMAMVESIVSLFLLIMLILIIVLIVFACKPWRFVFSSRSHASIKVNDLERPLVLDDANVVHNQSNELPRDYDLEGACCTNEGHFRSPRTRGLVYKQRLPAASPHVPQGDSLVLDVASNPVEDVSVGQTLKLSTAQLAEFQKHSRNVEIDRLQDFVQRDILDHRSCLTLEVITGPSSGLCCSVQSTIPSRLPLTLGRVSPSDLLIKDSEVSGKHALINWNLNKMKWELVDMGSLNGTLLNSQPINHSDTGGRHWGNPVELANGDIITLGTTSKVIVHITSQNRNHIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAARSASKLFPEIVANILSDSLKREKVLSFCDASNVLRDAFSQTEARINHHYEGCTATVLLVWADGDENFFAQCANVGDSACVVNVNGKDIKMTEDHKITSYSERLRIEQTGEPLRDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVRIDQASRPFAILASDGLWDVISMRKAMQLVLQMRERFSTDGENLAEKIANSLLGEARTHKTKDNTSVIFLDFDTFPRLPCKSAS 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2515 594 Gene3D - 183 317 - -
Glsi12g2515 594 PANTHER PROTEIN PHOSPHATASE 2C 321 579 IPR015655 GO:0004722|GO:0006470
Glsi12g2515 594 FunFam Protein phosphatase 2C 70 183 317 - -
Glsi12g2515 594 SUPERFAMILY SMAD/FHA domain 187 297 IPR008984 GO:0005515
Glsi12g2515 594 CDD PP2Cc 322 582 IPR001932 -
Glsi12g2515 594 SMART PP2C_4 304 580 IPR001932 -
Glsi12g2515 594 FunFam Protein phosphatase 2C 70 318 589 - -
Glsi12g2515 594 Pfam FHA domain 215 290 IPR000253 GO:0005515
Glsi12g2515 594 Pfam Protein phosphatase 2C 321 575 IPR001932 -
Glsi12g2515 594 SUPERFAMILY PP2C-like 323 584 IPR036457 -
Glsi12g2515 594 SMART FHA_2 213 265 IPR000253 GO:0005515
Glsi12g2515 594 ProSiteProfiles PPM-type phosphatase domain profile. 310 582 IPR001932 -
Glsi12g2515 594 ProSitePatterns PPM-type phosphatase domain signature. 347 355 IPR000222 GO:0043169
Glsi12g2515 594 CDD FHA_PP2C70-like 188 298 - -
Glsi12g2515 594 ProSiteProfiles Forkhead-associated (FHA) domain profile. 214 265 IPR000253 GO:0005515
Glsi12g2515 594 Gene3D - 318 587 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2515 Glsi-ChrGlsi12 38985268 38991770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2515 24 584 PP2C-type Phosphatase Gene Family AT5G19280 61.017 0.0 699