Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2463 ATGTTCACCCTTACTTCTATCAAAGGTATTGGTCGCCGTTTCGCTAACATTGTCTGCAAGAAAGCCGAAGTCGACATGAACAAAAGAGCTGGTGAGCCATCAGCTGCTGAACTTGATCAACTGATGGGTGTTGCGGCAAACCAATTCAAGATTCCTGACTGGTTTCTCAACAGGAAGAAGGATTAGTTCTCATGCTCAGTCAAGCTTTGCTGTTCCAATTTTCCTTGGCGACTTTCATGGTATAGTGGGTTTGCACCTTCTTCAAATGTTCTACTACACTCCGCCATTTTTTCTCTTTACCTGCCCGAATCCCCTCCCCTGGAGGTTCGTTTTTCCTTCCTGGACCTTGCTTCCCTGGGTCCACCCTCCTACGGCTTCCACACACTTGAGTTCTGCAATATAGTCCTCGCCACGGCAGGGTTCGATCCTACTTCGCATTCCGCTGATTACCAGGATTTCACCCCGTCACCTCGCCCATTGTTGCCAATTGGTCCCGGGCTCGATCTGAGGCCCCTCGTGGAGACACGGGCGAGTTTTCAGCGAGTGCTAGCTAGTGGAGCATTTAAGAGTGATTTGGTGGAGTCGAGCCGAGATGCTGATTTGAGGGCTTCGAAGTATATGAGGGTTGGCGGATTTTATGAAAATGTAGGCTTTAGGCAAGCTGATGGTGGAGATAACGTGACGCTTAAGCATCTGAAGGTTGATCAAGATGCACTAAATAAAGCGTTTCGTCACTTCGCTAAGTTTATTATTGAAAATGCCATGCAGAAGAAGAATTACTTAGAACAAGGAAAGCAAGGGTGGCTTCAATGCATTACTTGCGCCAGGTTCGCTAGAGTGGGCTGGATATGTTTGTTTCTTTTCATTTTGCTTGGTTGGCCTTTGTAG 888 0.4741 MFTLTSIKGIGRRFANIVCKKAEVDMNKRAGEPSAAELDQLMGVAANQFKIPDWFLNRKKDXFSCSVKLCCSNFPWRLSWYSGFAPSSNVLLHSAIFSLYLPESPPLEVRFSFLDLASLGPPSYGFHTLEFCNIVLATAGFDPTSHSADYQDFTPSPRPLLPIGPGLDLRPLVETRASFQRVLASGAFKSDLVESSRDADLRASKYMRVGGFYENVGFRQADGGDNVTLKHLKVDQDALNKAFRHFAKFIIENAMQKKNYLEQGKQGWLQCITCARFARVGWICLFLFILLGWPL 295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2463 295 Gene3D - 1 52 - -
Glsi12g2463 295 Pfam Ribosomal protein S13/S18 2 66 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Glsi12g2463 295 SUPERFAMILY S13-like H2TH domain 2 60 IPR010979 GO:0003676
Glsi12g2463 295 ProSiteProfiles Ribosomal protein S13 family profile. 1 51 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Glsi12g2463 295 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 1 62 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi12g2463 Glsi-ChrGlsi12 38652096 38656613 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2463 1 73 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 70.667 2.98e-29 107