Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2456 ATGTCCAACCTGTTCTCCAAGCACTTTCATCTCTGTTTCTTCAAGCTCAAATACCCCACCACCACCACCACCACACCCTTATCCCCACTACCCCACCCTAAACAACAACATCGCACCCCATCATCATCATCTCCTCTCTACGAAGGCGGCGGCGCCACTTCCTCTGCCGATCACTCAACCTCCAAATCCACCGACGAGTTCTTCTCCTCCTCTTCCGACTCCGACTCCTCGGATCCACCGCCAGACTTCGCCTCCGTCTTCGCTTCCCAGCGCTTCTTCTTCTCCTCCCCTGGTCTCTCCAACTCCATCGTCGAGTCCCAAGACACTCGTCCCCGTAACAACAACAACGTTAACGACGACGACGTTTTGATTCCCAGAGACGGTGTCAGAGTGCCCAAGTACTCTCTCAACCCCTACGTAGATTTCCGCCGTTCAATGCAAGAAATGATCGAATCCCGCGAACTGGTGGATCTCACAAAGGACTGGGACTATCTACACCGGCTCCTCCTAAGCTATCTTGCTATCAATCCTTCTCACACCCACAGGTACATTGTTCGAGCTTTCACCGACCTCGTCGTCGACCTTTTGTCCTCACCGCCGGAAACCACTCACTGCCGGAAAAAACCCAAGAACCGCCGGCACAATAGTTTCTCTGGGCGGCTGGTATAA 669 0.5366 MSNLFSKHFHLCFFKLKYPTTTTTTPLSPLPHPKQQHRTPSSSSPLYEGGGATSSADHSTSKSTDEFFSSSSDSDSSDPPPDFASVFASQRFFFSSPGLSNSIVESQDTRPRNNNNVNDDDVLIPRDGVRVPKYSLNPYVDFRRSMQEMIESRELVDLTKDWDYLHRLLLSYLAINPSHTHRYIVRAFTDLVVDLLSSPPETTHCRKKPKNRRHNSFSGRLV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2456 222 MobiDBLite consensus disorder prediction 24 79 - -
Glsi12g2456 222 Pfam Transcriptional repressor, ovate 135 195 IPR006458 -
Glsi12g2456 222 MobiDBLite consensus disorder prediction 206 222 - -
Glsi12g2456 222 MobiDBLite consensus disorder prediction 24 80 - -
Glsi12g2456 222 ProSiteProfiles OVATE domain profile. 131 194 IPR006458 -
Glsi12g2456 222 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 42 196 IPR038933 GO:0045892
Glsi12g2456 222 MobiDBLite consensus disorder prediction 200 222 - -
Glsi12g2456 222 NCBIfam uncharacterized plant-specific domain TIGR01568 131 197 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2456 Glsi-ChrGlsi12 38620006 38620674 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi12g2456 Ovate 1.3e-21 No_clan